| 
          carl: a likelihood-free inference toolbox
         | 
        
           Published 2016-05-11  
         | 
        
           10.21105/joss.00011
         | 
      
      
        | 
          Application Skeleton: Generating Synthetic Applications for Infrastructure Research
         | 
        
           Published 2016-05-11  
         | 
        
           10.21105/joss.00017
         | 
      
      
        | 
          mst_clustering: Clustering via Euclidean Minimum Spanning Trees
         | 
        
           Published 2016-05-16  
         | 
        
           10.21105/joss.00012
         | 
      
      
        | 
          pyuca: a Python implementation of the Unicode Collation Algorithm
         | 
        
           Published 2016-05-18  
         | 
        
           10.21105/joss.00021
         | 
      
      
        | 
          Xenomapper: Mapping reads in a mixed species context
         | 
        
           Published 2016-05-22  
         | 
        
           10.21105/joss.00018
         | 
      
      
        | 
          R3D2: Relativistic Reactive Riemann problem solver for Deflagrations and Detonations
         | 
        
           Published 2016-05-27  
         | 
        
           10.21105/joss.00016
         | 
      
      
        | 
          Representation and Manipulation of Genomic Tuples in R
         | 
        
           Published 2016-05-28  
         | 
        
           10.21105/joss.00020
         | 
      
      
        | 
          Scowl: a Scala DSL for programming with the OWL API
         | 
        
           Published 2016-05-31  
         | 
        
           10.21105/joss.00023
         | 
      
      
        | 
          corner.py: Scatterplot matrices in Python
         | 
        
           Published 2016-06-08  
         | 
        
           10.21105/joss.00024
         | 
      
      
        | 
          Armadillo: a template-based C++ library for linear algebra
         | 
        
           Published 2016-06-10  
         | 
        
           10.21105/joss.00026
         | 
      
      
        | 
          GeneNetwork: framework for web-based genetics
         | 
        
           Published 2016-06-17  
         | 
        
           10.21105/joss.00025
         | 
      
      
        | 
          Git-RDM: A research data management plugin for the Git version control system
         | 
        
           Published 2016-06-19  
         | 
        
           10.21105/joss.00029
         | 
      
      
        | 
          Phylogemetric: A Python library for calculating phylogenetic network metrics
         | 
        
           Published 2016-06-20  
         | 
        
           10.21105/joss.00028
         | 
      
      
        | 
          Prism: Multiple spline regression with regularization, dimensionality reduction, and feature selection
         | 
        
           Published 2016-07-01  
         | 
        
           10.21105/joss.00031
         | 
      
      
        | 
          tidytext: Text Mining and Analysis Using Tidy Data Principles in R
         | 
        
           Published 2016-07-11  
         | 
        
           10.21105/joss.00037
         | 
      
      
        | 
          gwdegree: Improving interpretation of geometrically-weighted degree estimates in exponential random graph models
         | 
        
           Published 2016-07-13  
         | 
        
           10.21105/joss.00036
         | 
      
      
        | 
          RSMTool: collection of tools building and evaluating automated scoring models
         | 
        
           Published 2016-07-28  
         | 
        
           10.21105/joss.00033
         | 
      
      
        | 
          Gillespie.jl: Stochastic Simulation Algorithm in Julia
         | 
        
           Published 2016-07-30  
         | 
        
           10.21105/joss.00042
         | 
      
      
        | 
          PsychoPhysioCollector: A Smartphone-Based Data Collection App for Psychophysiological Research
         | 
        
           Published 2016-08-04  
         | 
        
           10.21105/joss.00040
         | 
      
      
        | 
          Advanced viewshed analysis: a Quantum GIS plug-in for the analysis of visual landscapes
         | 
        
           Published 2016-08-09  
         | 
        
           10.21105/joss.00032
         | 
      
      
        | 
          PyGBe: Python, GPUs and Boundary elements for biomolecular electrostatics
         | 
        
           Published 2016-08-18  
         | 
        
           10.21105/joss.00043
         | 
      
      
        | 
          rdefra: Interact with the UK AIR Pollution Database from DEFRA
         | 
        
           Published 2016-08-28  
         | 
        
           10.21105/joss.00051
         | 
      
      
        | 
          ChainConsumer
         | 
        
           Published 2016-08-30  
         | 
        
           10.21105/joss.00045
         | 
      
      
        | 
          cartography: Create and Integrate Maps in your R Workflow
         | 
        
           Published 2016-08-30  
         | 
        
           10.21105/joss.00054
         | 
      
      
        | 
          Osprey: Hyperparameter Optimization for Machine Learning
         | 
        
           Published 2016-09-07  
         | 
        
           10.21105/joss.00034
         | 
      
      
        | 
          PsychoPhysioPipeline: A Processing and Analysis Pipeline for Psychophysiological Research
         | 
        
           Published 2016-09-09  
         | 
        
           10.21105/joss.00041
         | 
      
      
        | 
          sourmash: a library for MinHash sketching of DNA
         | 
        
           Published 2016-09-14  
         | 
        
           10.21105/joss.00027
         | 
      
      
        | 
          ezknitr: Avoid the Typical Working Directory Pain When Using 'knitr'
         | 
        
           Published 2016-09-20  
         | 
        
           10.21105/joss.00075
         | 
      
      
        | 
          hebbRNN: A Reward-Modulated Hebbian Learning Rule for Recurrent Neural Networks
         | 
        
           Published 2016-09-23  
         | 
        
           10.21105/joss.00060
         | 
      
      
        | 
          RcppCNPy: Read-Write Support for NumPy Files in R
         | 
        
           Published 2016-09-25  
         | 
        
           10.21105/joss.00055
         | 
      
      
        | 
          Python Active-subspaces Utility Library
         | 
        
           Published 2016-09-29  
         | 
        
           10.21105/joss.00079
         | 
      
      
        | 
          SEP: Source Extractor as a library
         | 
        
           Published 2016-10-05  
         | 
        
           10.21105/joss.00058
         | 
      
      
        | 
          GFF3toEMBL: Preparing annotated assemblies for submission to EMBL
         | 
        
           Published 2016-10-06  
         | 
        
           10.21105/joss.00080
         | 
      
      
        | 
          pygtc: beautiful parameter covariance plots (aka. Giant Triangle Confusograms)
         | 
        
           Published 2016-10-08  
         | 
        
           10.21105/joss.00046
         | 
      
      
        | 
          rintrojs: A Wrapper for the Intro.js Library
         | 
        
           Published 2016-10-11  
         | 
        
           10.21105/joss.00063
         | 
      
      
        | 
          LAS: an integrated language analysis tool for multiple languages
         | 
        
           Published 2016-10-12  
         | 
        
           10.21105/joss.00035
         | 
      
      
        | 
          edarf: Exploratory Data Analysis using Random Forests
         | 
        
           Published 2016-10-23  
         | 
        
           10.21105/joss.00092
         | 
      
      
        | 
          VCFPy: a Python 3 library with good support for both reading and writing VCF
         | 
        
           Published 2016-10-25  
         | 
        
           10.21105/joss.00085
         | 
      
      
        | 
          Habfuzz: A tool to calculate the instream hydraulic habitat suitability using fuzzy logic and fuzzy Bayesian inference
         | 
        
           Published 2016-10-27  
         | 
        
           10.21105/joss.00082
         | 
      
      
        | 
          Correlation Trait Loci (CTL) mapping: phenotype network inference subject to genotype
         | 
        
           Published 2016-10-30  
         | 
        
           10.21105/joss.00087
         | 
      
      
        | 
          rucrdtw: Fast time series subsequence search in R
         | 
        
           Published 2016-11-07  
         | 
        
           10.21105/joss.00100
         | 
      
      
        | 
          plater: Read, Tidy, and Display Data from Microtiter Plates
         | 
        
           Published 2016-11-08  
         | 
        
           10.21105/joss.00106
         | 
      
      
        | 
          xpecgen: A program to calculate x-ray spectra generated in tungsten anodes
         | 
        
           Published 2016-11-09  
         | 
        
           10.21105/joss.00062
         | 
      
      
        | 
          RAILS and Cobbler: Scaffolding and automated finishing of draft genomes using long DNA sequences
         | 
        
           Published 2016-11-17  
         | 
        
           10.21105/joss.00116
         | 
      
      
        | 
          DoSOCS: A System for SPDX 2.0 Document Creation and Storage
         | 
        
           Published 2016-11-20  
         | 
        
           10.21105/joss.00038
         | 
      
      
        | 
          Eclipse Golo
         | 
        
           Published 2016-12-01  
         | 
        
           10.21105/joss.00093
         | 
      
      
        | 
          popeye: a population receptive field estimation tool
         | 
        
           Published 2016-12-01  
         | 
        
           10.21105/joss.00103
         | 
      
      
        | 
          ReproZip: The Reproducibility Packer
         | 
        
           Published 2016-12-01  
         | 
        
           10.21105/joss.00107
         | 
      
      
        | 
          resampy: efficient sample rate conversion in Python
         | 
        
           Published 2016-12-05  
         | 
        
           10.21105/joss.00125
         | 
      
      
        | 
          finreportr: Financial Data from U.S. Securities and Exchange Commission
         | 
        
           Published 2016-12-05  
         | 
        
           10.21105/joss.00119
         |