Table of Contents Year 2018

Volume 3

pyodesys: Straightforward numerical integration of ODE systems from Python
Published 04-01-2018
10.21105/joss.00490
BayesianNetwork: Interactive Bayesian Network Modeling and Analysis
Published 04-01-2018
10.21105/joss.00425
Moltres: finite element based simulation of molten salt reactors
Published 08-01-2018
10.21105/joss.00298
simpleCache: R caching for reproducible, distributed, large-scale projects
Published 10-01-2018
10.21105/joss.00463
PySwarms: a research toolkit for Particle Swarm Optimization in Python
Published 11-01-2018
10.21105/joss.00433
highlightHTML: CSS Formatting of R Markdown Documents
Published 12-01-2018
10.21105/joss.00185
arrgh: a Go interface to the OpenCPU R server system
Published 16-01-2018
10.21105/joss.00517
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
Published 16-01-2018
10.21105/joss.00464
phyphy: Python package for facilitating the execution and parsing of HyPhy standard analyses
Published 17-01-2018
10.21105/joss.00514
Fitting a Gamma-Gompertz survival model to capture-recapture data collected on free-ranging animal populations
Published 19-01-2018
10.21105/joss.00216
Visualizing genome synteny with xmatchview
Published 19-01-2018
10.21105/joss.00497
pyneqsys: Solve symbolically defined systems of non-linear equations numerically
Published 22-01-2018
10.21105/joss.00531
Category Encoders: a scikit-learn-contrib package of transformers for encoding categorical data
Published 22-01-2018
10.21105/joss.00501
CheSweet: An application to predict glycan’s chemicals shifts
Published 22-01-2018
10.21105/joss.00488
PFEIFER: Preprocessing Framework for Electrograms Intermittently Fiducialized from Experimental Recordings
Published 24-01-2018
10.21105/joss.00472
The drake R package: a pipeline toolkit for reproducibility and high-performance computing
Published 26-01-2018
10.21105/joss.00550
Multiphonon: Phonon Density of States tools for Inelastic Neutron Scattering Powder Data
Published 30-01-2018
10.21105/joss.00440
origami: A Generalized Framework for Cross-Validation in R
Published 30-01-2018
10.21105/joss.00512
IDESolver: a general purpose integro-differential equation solver
Published 31-01-2018
10.21105/joss.00542
opty: Software for trajectory optimization and parameter identification using direct collocation
Published 31-01-2018
10.21105/joss.00300
Bitstream -- Binary Data for Humans
Published 31-01-2018
10.21105/joss.00541
BATMAN: Statistical analysis for expensive computer codes made easy
Published 31-01-2018
10.21105/joss.00493
Finch: a tool adding dynamic abundance filtering to genomic MinHashing
Published 01-02-2018
10.21105/joss.00505
Pymagicc: A Python wrapper for the simple climate model MAGICC
Published 04-02-2018
10.21105/joss.00516
The Experiment Factory: Reproducible Experiment Containers
Published 05-02-2018
10.21105/joss.00521
prisonbrief: An R package that returns tidy data from the World Prison Brief website
Published 05-02-2018
10.21105/joss.00361
The psycho Package: an Efficient and Publishing-Oriented Workflow for Psychological Science
Published 05-02-2018
10.21105/joss.00470
CheckQC: Quick quality control of Illumina sequencing runs
Published 05-02-2018
10.21105/joss.00556
DART: Dynamic Animation and Robotics Toolkit
Published 06-02-2018
10.21105/joss.00500
CoreRobotics: An object-oriented C++ library with cross-language wrappers for cross-platform robot control
Published 06-02-2018
10.21105/joss.00489
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome
Published 08-02-2018
10.21105/joss.00527
weathercan: Download and format weather data from Environment and Climate Change Canada
Published 12-02-2018
10.21105/joss.00571
PyDMD: Python Dynamic Mode Decomposition
Published 12-02-2018
10.21105/joss.00530
Masks2Metrics (M2M): A Matlab Toolbox for Gold Standard Morphometrics
Published 12-02-2018
10.21105/joss.00436
EFAshiny: An User-Friendly Shiny Application for Exploratory Factor Analysis
Published 12-02-2018
10.21105/joss.00567
ChebTools: C++11 (and Python) tools for working with Chebyshev expansions
Published 12-02-2018
10.21105/joss.00569
Phonetic Algorithms in R
Published 14-02-2018
10.21105/joss.00480
grapherator: A Modular Multi-Step Graph Generator
Published 19-02-2018
10.21105/joss.00528
psrqpy: a python interface for querying the ATNF pulsar catalogue
Published 19-02-2018
10.21105/joss.00538
register: Registration for Exponential Family Functional Data
Published 19-02-2018
10.21105/joss.00557
GIBBON: The Geometry and Image-Based Bioengineering add-On
Published 19-02-2018
10.21105/joss.00506
h5preserve: Thin wrapper around h5py, inspired by camel
Published 20-02-2018
10.21105/joss.00581
G³M-f a global gradient-based groundwater modelling framwork
Published 20-02-2018
10.21105/joss.00548
ODES: a high level interface to ODE and DAE solvers
Published 23-02-2018
10.21105/joss.00165
ivprobit:An R package to estimate the instrumental variables probit model
Published 23-02-2018
10.21105/joss.00523
Missingno: a missing data visualization suite
Published 27-02-2018
10.21105/joss.00547
ClimDown: Climate Downscaling in R
Published 28-02-2018
10.21105/joss.00360
Gramm: grammar of graphics plotting in Matlab
Published 06-03-2018
10.21105/joss.00568
coalitions: Coalition probabilities in multi-party democracies
Published 11-03-2018
10.21105/joss.00606
TSrepr R package: Time Series Representations
Published 12-03-2018
10.21105/joss.00577
Displaying papers 1 - 50 of 254 in total

Table of Contents
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ISSN 2475-9066