sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files

Python Submitted 21 April 2022Published 01 June 2022
Review

Editor: @jmschrei (all papers)
Reviewers: @fasnicar (all reviews), @marouenbg (all reviews)

Authors

Maxime Borry (0000-0001-9140-7559), Alexander Hübner (0000-0003-3572-9996), Christina Warinner (0000-0002-4528-5877)

Citation

Borry et al., (2022). sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files. Journal of Open Source Software, 7(74), 4360, https://doi.org/10.21105/joss.04360

Copy citation string · Copy BibTeX  
Tags

metagenomics microbiome alignment sam bam cram htslib taxonomy LCA ancestor

Altmetrics
Markdown badge

 

License

Authors of JOSS papers retain copyright.

This work is licensed under a Creative Commons Attribution 4.0 International License.

Creative Commons License

Public user content licensed CC BY 4.0 unless otherwise specified.
ISSN 2475-9066