JOSS Papers: metagenomics

Published Papers

published Published about 1 month ago

nf-core/coproID v2.0: An improved pipeline for the identification of (palaeo)faecal depositors

SCSS Python Nextflow

10.21105/joss.09324

published Published 4 months ago

Blini: lightweight nucleotide sequence search and dereplication

Go Python

10.21105/joss.09494

published Published 4 months ago

PANKEGG: Integrative Visualisation and Comparison of Metagenome-Assembled Genomes Annotation, Taxonomy, and Quality

Python

10.21105/joss.09188

published Published 11 months ago

GraphBin-Tk: assembly graph-based metagenomic binning toolkit

Python

10.21105/joss.07713

published Published over 1 year ago

Easy16S: a user-friendly Shiny web-service for exploration and visualization of microbiome data.

R

10.21105/joss.06704

published Published over 1 year ago

Binette: a fast and accurate bin refinement tool to construct high quality Metagenome Assembled Genomes.

Python

10.21105/joss.06782

published Published almost 2 years ago

sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets

Python Nix C

10.21105/joss.06830

published Published about 2 years ago

Acanthophis: a comprehensive plant hologenomics pipeline

Python

10.21105/joss.06062

published Published about 2 years ago

Koverage: Read-coverage analysis for massive (meta)genomics datasets

Python

@beardymcjohnface

10.21105/joss.06235

published Published over 2 years ago

MiscMetabar: an R package to facilitate visualization and reproducibility in metabarcoding analysis

R

@adrientaudiere

10.21105/joss.06038

Displaying papers 1 - 10 of 21 in total

← PreviousNext →

Table of Contents
Public user content licensed CC BY 4.0 unless otherwise specified.
ISSN 2475-9066