@Midnighter
published Published 10 months ago
MetaGenePipe: An Automated, Portable Pipeline for Contig-based Functional and Taxonomic Analysis
wdl Jupyter Notebook Python
@ParkvilleData
published Published 12 months ago
Metagenomic classification with KrakenUniq on low-memory computers
Perl
@salzberg
published Published over 1 year ago
sam2lca: Lowest Common Ancestor for SAM/BAM/CRAM alignment files
Python
@maxibor
published Published about 2 years ago
Opfi: A Python package for identifying gene clusters in large genomics and metagenomics data sets
Python Jupyter Notebook
@alexismhill3
published Published over 2 years ago
SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data
Perl Python Prolog
@lskatz
published Published almost 3 years ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
Python
@akrinos
published Published over 3 years ago
LTRpred: de novo annotation of intact retrotransposons
R UnrealScript
@HajkD
published Published over 4 years ago
Sourcepredict: Prediction of metagenomic sample sources using dimension reduction followed by machine learning classification
Python
published Published over 4 years ago
@schuyler-smith
