perbase: A performant per-base sequencing metrics toolkit with accurate handling of complex alignments

Python Rust Submitted 29 July 2025Published 16 March 2026
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Editor: @fboehm (all papers)
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Authors

Seth Stadick (0009-0002-0915-9459)

Citation

Stadick, S., (2026). perbase: A performant per-base sequencing metrics toolkit with accurate handling of complex alignments. Journal of Open Source Software, 11(119), 9774, https://doi.org/10.21105/joss.09774

@article{Stadick2026, doi = {10.21105/joss.09774}, url = {https://doi.org/10.21105/joss.09774}, year = {2026}, publisher = {The Open Journal}, volume = {11}, number = {119}, pages = {9774}, author = {Stadick, Seth}, title = {perbase: A performant per-base sequencing metrics toolkit with accurate handling of complex alignments}, journal = {Journal of Open Source Software} }
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rust bioinformatics genomics sequencing depth

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ISSN 2475-9066