JOSS Papers: genomics

All Papers
1107
 Published Papers
945
 Active Papers
162
published Published 17 days ago

LTRpred: de novo annotation of intact retrotransposons

R UnrealScript
@HajkD
10.21105/joss.02170
published Published about 2 months ago

Recan: Python tool for analysis of recombination events in viral genomes

Python
@babinyurii
10.21105/joss.02014
published Published 4 months ago

covtobed: a simple and fast tool to extract coverage tracks from BAM files

C++
@telatin
10.21105/joss.02119
published Published 4 months ago

fqfa: A pure Python package for genomic sequence files

Python
@afrubin
10.21105/joss.02076
published Published 5 months ago

FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets

Python
@tkchafin
10.21105/joss.02030
published Published 5 months ago

ReferenceSeeker: rapid determination of appropriate reference genomes

Python
@oschwengers
10.21105/joss.01994
published Published 5 months ago

NCBImeta: efficient and comprehensive metadata retrieval from NCBI databases

Python
@ktmeaton
10.21105/joss.01990
published Published 7 months ago

alignparse: A Python package for parsing complex features from high-throughput long-read sequencing

Python Jupyter Notebook
@jbloom
10.21105/joss.01915
published Published 7 months ago

Mashtree: a rapid comparison of whole genome sequence files

Perl
@lskatz
10.21105/joss.01762
published Published 7 months ago

Bedtoolsr: An R package for genomic data analysis and manipulation

R Python
@dphansti
10.21105/joss.01742
Displaying papers 1 - 10 of 33 in total

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