JOSS Papers: genomics

All Papers
952
 Published Papers
844
 Active Papers
108
published Published 12 days ago

FGTpartitioner: A rapid method for parsimonious delimitation of ancestry breakpoints in large genome-wide SNP datasets

Python
@tkchafin
10.21105/joss.02030
published Published 14 days ago

ReferenceSeeker: rapid determination of appropriate reference genomes

Python
@oschwengers
10.21105/joss.01994
published Published 15 days ago

NCBImeta: efficient and comprehensive metadata retrieval from NCBI databases

Python
@ktmeaton
10.21105/joss.01990
published Published 2 months ago

alignparse: A Python package for parsing complex features from high-throughput long-read sequencing

Python Jupyter Notebook
@jbloom
10.21105/joss.01915
published Published 2 months ago

Mashtree: a rapid comparison of whole genome sequence files

Perl
@lskatz
10.21105/joss.01762
published Published 2 months ago

Bedtoolsr: An R package for genomic data analysis and manipulation

R Python
@dphansti
10.21105/joss.01742
published Published 7 months ago

The UCSCXenaTools R package: a toolkit for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq

R XQuery
@ShixiangWang
10.21105/joss.01627
published Published 7 months ago

ORIS: An interactive software tool for prediction of replication origin in prokaryotic genomes

Java
@urmi-21
10.21105/joss.01589
published Published 7 months ago

CGIMP: Real-time exploration and covariate projection for self-organizing map datasets

Python JavaScript
@adadiehl
10.21105/joss.01520
published Published 10 months ago

rGUIDANCE – alignment confidence score computation in R

R C++
@FranzKrah
10.21105/joss.01350
Displaying papers 1 - 10 of 29 in total

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