JOSS Papers: genomics

All Papers
3417
 Published Papers
2983
 Active Papers
434
published Published 4 months ago

delfies: a Python package for the detection of DNA breakpoints with neo-telomere addition

Python
@bricoletc
10.21105/joss.07385
published Published 5 months ago

Mashpit: sketching out genomic epidemiology

Python
@tongzhouxu
10.21105/joss.07306
published Published 5 months ago

pyPLNmodels: A Python package to analyze multivariate high-dimensional count data

Jupyter Notebook Python R
@bastien-mva
10.21105/joss.06969
published Published 8 months ago

Binette: a fast and accurate bin refinement tool to construct high quality Metagenome Assembled Genomes.

Python
@JeanMainguy
10.21105/joss.06782
published Published 8 months ago

Back to sequences: Find the origin of k-mers

Python Rust
@pierrepeterlongo
10.21105/joss.07066
published Published 8 months ago

primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other

Python
@dr-joe-wirth
10.21105/joss.06850
published Published 11 months ago

sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets

Python Nix C
@bluegenes
10.21105/joss.06830
published Published 12 months ago

HARE: A Python workflow for analyzing genomic feature enrichment in GWAS datasets

Python
@ossmith
10.21105/joss.06359
published Published about 1 year ago

Syn-CpG-Spacer: A Panel web app for synonymous recoding of viral genomes with CpG dinucleotides

Python
@oleksulkowski
10.21105/joss.06332
published Published about 1 year ago

autoStreamTree: Genomic variant data fitted to geospatial networks

Python
@tkchafin
10.21105/joss.06160
Displaying papers 1 - 10 of 73 in total

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ISSN 2475-9066