JOSS Papers: bioinformatics

Published Papers

published Published 18 days ago

Fastsubtrees: simple and efficient subtrees extractions in Python with applications to NCBI taxonomy

Dockerfile Python

10.21105/joss.04755

published Published 27 days ago

btllib: A C++ library with Python interface for efficient genomic sequence processing

Python C R

10.21105/joss.04720

published Published 27 days ago

basilisk: a Bioconductor package for managing Python environments

R Python

10.21105/joss.04742

published Published about 2 months ago

VPsearch: fast exact sequence similarity search for genomic sequences

Dockerfile Python Cython C++

10.21105/joss.04236

published Published 3 months ago

PCRedux: A Quantitative PCR Machine Learning Toolkit

R JavaScript

10.21105/joss.04407

published Published 6 months ago

MitoHEAR: an R package for the estimation and downstream statistical analysis of the mitochondrial DNA heteroplasmy calculated from single-cell datasets

R

@gabrielelubatti

10.21105/joss.04265

published Published 7 months ago

Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes

Python C Cython

10.21105/joss.04296

published Published 8 months ago

Rainbow: Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow

Python Jupyter Notebook

10.21105/joss.04080

published Published 10 months ago

Rasusa: Randomly subsample sequencing reads to a specified coverage

Rust

10.21105/joss.03941

published Published about 1 year ago

BioProv - A provenance library for bioinformatics workflows

Python

10.21105/joss.03622

Displaying papers 1 - 10 of 64 in total

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ISSN 2475-9066