JOSS Papers: bioinformatics

Published Papers

published Published about 4 hours ago

stylo: a lightweight nanopore assembly pipeline optimized for enteric bacteria

Nextflow

10.21105/joss.09695

published Published 4 days ago

scpviz: A Python bioinformatics toolkit for Single-cell Proteomics and multi-omics analysis

Jupyter Notebook Python

10.21105/joss.10303

published Published 5 days ago

CGView.js: a JavaScript package for visualizing small genomes

JavaScript Ruby

10.21105/joss.09930

published Published 7 days ago

ecodive: Parallel and Memory-Efficient R Package for Ecological Diversity Analysis

R

10.21105/joss.09777

published Published 18 days ago

AOC: A Snakemake workflow for the characterization of natural selection in protein-coding genes

Python HyPhy

10.21105/joss.09872

published Published about 1 month ago

PileupCaller: A command-line tool to sample genotypes from low-coverage sequencing data of ancient DNA

Haskell D Python

10.21105/joss.08634

published Published about 1 month ago

NPLinker 2: a modular and customizable framework for paired omics analyses

Python Mustache

@justinjjvanderhooft

10.21105/joss.09528

published Published 3 months ago

perbase: A performant per-base sequencing metrics toolkit with accurate handling of complex alignments

Python Rust

10.21105/joss.09774

published Published 4 months ago

dbparser: An R Package for Parsing and Integrating Pharmacological Databases

R

10.21105/joss.09950

published Published 5 months ago

RustSASA: A Rust Crate for Accelerated Solvent Accessible Surface Area Calculations

Rust Python C++

10.21105/joss.09537

Displaying papers 1 - 10 of 111 in total

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