JOSS Papers: bioinformatics

Published Papers

published Published about 1 month ago

MitoHEAR: an R package for the estimation and downstream statistical analysis of the mitochondrial DNA heteroplasmy calculated from single-cell datasets

R

@gabrielelubatti

10.21105/joss.04265

published Published 2 months ago

Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes

Python C Cython

10.21105/joss.04296

published Published 3 months ago

Rainbow: Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow

Python Jupyter Notebook

10.21105/joss.04080

published Published 5 months ago

Rasusa: Randomly subsample sequencing reads to a specified coverage

Rust

10.21105/joss.03941

published Published 8 months ago

BioProv - A provenance library for bioinformatics workflows

Python

10.21105/joss.03622

published Published 8 months ago

Opfi: A Python package for identifying gene clusters in large genomics and metagenomics data sets

Python Jupyter Notebook

10.21105/joss.03678

published Published about 1 year ago

Bacting: a next generation, command line version of Bioclipse

Java

10.21105/joss.02558

published Published about 1 year ago

OpenOmics: A bioinformatics API to integrate multi-omics datasets and interface with public databases.

Python

10.21105/joss.03249

published Published over 1 year ago

REGENS: an open source Python package for simulating realistic autosomal genotypes

Python

10.21105/joss.02743

published Published over 1 year ago

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

Python Perl

10.21105/joss.02906

Displaying papers 1 - 10 of 59 in total

Public user content licensed CC BY 4.0 unless otherwise specified.
ISSN 2475-9066