JOSS Papers: bioinformatics

All Papers
2411
 Published Papers
2161
 Active Papers
250
published Published 14 days ago

FrESCO: Framework for Exploring Scalable Computational Oncology

Python Jupyter Notebook
@aspannaus
10.21105/joss.05345
published Published 20 days ago

Powering single-cell analyses in the browser with WebAssembly

Dockerfile JavaScript
@LTLA
10.21105/joss.05603
published Published 2 months ago

SeqPanther: Sequence manipulation and mutation statistics toolset

Python
@jsan4christ
10.21105/joss.05305
published Published 3 months ago

TAXPASTA: TAXonomic Profile Aggregation and STAndardisation

@Midnighter
10.21105/joss.05627
published Published 5 months ago

mutyper: assigning and summarizing mutation types for analyzing germline mutation spectra

Python
@WSDeWitt
10.21105/joss.05227
published Published 6 months ago

Pynteny: a Python package to perform synteny-aware, profile HMM-based searches in sequence databases

Dockerfile Python
@Robaina
10.21105/joss.05289
published Published 9 months ago

RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes

M4 C
@cagret
10.21105/joss.04363
published Published 11 months ago

Fastsubtrees: simple and efficient subtrees extractions in Python with applications to NCBI taxonomy

Dockerfile Python
@ggonnella
10.21105/joss.04755
published Published 11 months ago

btllib: A C++ library with Python interface for efficient genomic sequence processing

Python C R
@vlad0x00
10.21105/joss.04720
published Published 11 months ago

basilisk: a Bioconductor package for managing Python environments

R Python
@LTLA
10.21105/joss.04742
Displaying papers 1 - 10 of 71 in total

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ISSN 2475-9066