JOSS Papers: sequencing

All Papers
3936
 Published Papers
3306
 Active Papers
630
published Published 4 months ago

Gene Fetch: A Python tool for sequence retrieval from GenBank across the tree of life

Python
@SchistoDan
10.21105/joss.08456
published Published 5 months ago

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions

Rust
@Rbfinch
10.21105/joss.08048
published Published 6 months ago

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences

Python Jupyter Notebook
@GavinHuttley
10.21105/joss.07765
published Published 7 months ago

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files.

Python Nextflow Groovy
@abhi18av
10.21105/joss.07608
published Published about 1 year ago

Pycashier: cash in on DNA barcode tags

Python
@daylinmorgan
10.21105/joss.06891
published Published about 1 year ago

lintsampler: Easy random sampling via linear interpolation

Python
@aneeshnaik
10.21105/joss.06906
published Published about 1 year ago

Back to sequences: Find the origin of k-mers

Python Rust
@pierrepeterlongo
10.21105/joss.07066
published Published over 1 year ago

universalmotif: An R package for biological motif analysis

R C++ C
@bjmt
10.21105/joss.07012
published Published over 1 year ago

dsmmR: Estimation and Simulation of Drifting Semi-Markov Models

R
@Mavrogiannis-Ioannis
10.21105/joss.05572
published Published almost 2 years ago

cstag and cstag-cli: tools for manipulating and visualizing cs tags

Python
@akikuno
10.21105/joss.06066
Displaying papers 1 - 10 of 57 in total

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ISSN 2475-9066