phylo2vec: a library for vector-based phylogenetic tree manipulation

Ruby Rust Python R Submitted 12 June 2025 • Published 28 October 2025
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Authors

Neil Scheidwasser (0000-0001-9922-0289), Ayush Nag (0009-0008-1790-597X), Matthew J. Penn (0000-0001-8682-5393), Anthony Jakob (0000-0002-0996-1356), Frederik Mølkjær Andersen (0009-0004-4071-3707), Mark Poulsen Khurana (0000-0002-1123-7674), Landung Setiawan (0000-0002-1624-2667), David A. Duchêne (0000-0002-5479-1974), Samir Bhatt (0000-0002-0891-4611)

Citation

Scheidwasser et al., (2025). phylo2vec: a library for vector-based phylogenetic tree manipulation. Journal of Open Source Software, 10(114), 9040, https://doi.org/10.21105/joss.09040

@article{Scheidwasser2025, doi = {10.21105/joss.09040}, url = {https://doi.org/10.21105/joss.09040}, year = {2025}, publisher = {The Open Journal}, volume = {10}, number = {114}, pages = {9040}, author = {Scheidwasser, Neil and Nag, Ayush and Penn, Matthew J. and Jakob, Anthony and Andersen, Frederik Mølkjær and Khurana, Mark Poulsen and Setiawan, Landung and Duchêne, David A. and Bhatt, Samir}, title = {phylo2vec: a library for vector-based phylogenetic tree manipulation}, journal = {Journal of Open Source Software} }
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bioinformatics phylogenetics binary tree

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ISSN 2475-9066