published Published 9 months ago
smot: a python package and CLI tool for contextual phylogenetic subsampling
Python
published Published 9 months ago
teiphy: A Python Package for Converting TEI XML Collations to NEXUS and Other Formats
Python
published Published 9 months ago
hstrat: a Python Package for phylogenetic inference on distributed digital evolution populations
Python
published Published about 1 year ago
BTE: a Python module for pandemic-scale mutation-annotated phylogenetic trees
Python C++ Cython
published Published almost 2 years ago
Nextclade: clade assignment, mutation calling and quality control for viral genomes
Ruby C++
published Published almost 2 years ago
ShUShER: private browser-based placement of sensitive genome samples on phylogenetic trees
Python JavaScript
published Published almost 2 years ago
Ngesh: a Python library for synthetic phylogenetic data
Python
published Published over 2 years ago
Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens
Python Perl
published Published almost 4 years ago