JOSS Papers: phylogenetics

All Papers
4012
 Published Papers
3559
 Active Papers
452
published Published about 2 months ago

scoup: Simulate Codon Sequences with Darwinian Selection Incorporated as an Ornstein-Uhlenbeck Process

R Visual Basic 6.0
@thsadiq
10.21105/joss.09797
published Published 7 months ago

phylo2vec: a library for vector-based phylogenetic tree manipulation

Ruby Rust Python R
@Neclow
10.21105/joss.09040
published Published 11 months ago

<code>ggret</code>: An R package for visualising and manipulating tree‑based phylogenetic networks

R
@grdspcht
10.21105/joss.07773
published Published 11 months ago

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences

Python Jupyter Notebook
@GavinHuttley
10.21105/joss.07765
published Published over 1 year ago

PhyloX: A Python package for complete phylogenetic network workflows

Python
@RemieJanssen
10.21105/joss.06427
published Published over 1 year ago

LinguiPhyR: A Package for Linguistic Phylogenetic Analysis in R

R
@marccanby
10.21105/joss.06201
published Published over 1 year ago

DendroPy 5: a mature Python library for phylogenetic computing

Python R Turing
@mmore500
10.21105/joss.06943
published Published over 1 year ago

TREvoSim v3: An individual based simulation for generating trees and character data

C++ R
@RussellGarwood
10.21105/joss.06722
published Published over 3 years ago

smot: a python package and CLI tool for contextual phylogenetic subsampling

Python
@arendsee
10.21105/joss.04193
published Published over 3 years ago

teiphy: A Python Package for Converting TEI XML Collations to NEXUS and Other Formats

Python
@jjmccollum
10.21105/joss.04879
Displaying papers 1 - 10 of 29 in total

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ISSN 2475-9066