Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape

Python Cython Jupyter Notebook Submitted 23 November 2022Published 09 March 2023
Review

Editor: @csoneson (all papers)
Reviewers: @Farnazmdi (all reviews), @Robaina (all reviews)

Authors

Ayush Pandey (0000-0003-3590-4459), William Poole (0000-0002-2958-6776), Anandh Swaminathan (0000-0001-9935-6530), Victoria Hsiao (0000-0001-9297-1522), Richard M. Murray (0000-0002-5785-7481)

Citation

Pandey et al., (2023). Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape. Journal of Open Source Software, 8(83), 5057, https://doi.org/10.21105/joss.05057

@article{Pandey2023, doi = {10.21105/joss.05057}, url = {https://doi.org/10.21105/joss.05057}, year = {2023}, publisher = {The Open Journal}, volume = {8}, number = {83}, pages = {5057}, author = {Ayush Pandey and William Poole and Anandh Swaminathan and Victoria Hsiao and Richard M. Murray}, title = {Fast and flexible simulation and parameter estimation for synthetic biology using bioscrape}, journal = {Journal of Open Source Software} }
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synthetic biology systems biology deterministic and stochastic simulations parameter inference

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