Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

Python Perl Submitted 09 December 2020 • Published 07 January 2021
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Authors

John Huddleston (0000-0002-4250-2063), James Hadfield (0000-0002-4118-6468), Thomas R. Sibley (0000-0001-5269-2297), Jover Lee (0000-0002-2391-0512), Kairsten Fay (0000-0002-6529-9205), Misja Ilcisin (0000-0002-1468-7697), Elias Harkins (0000-0001-6525-9134), Trevor Bedford (0000-0002-4039-5794), Richard A. Neher (0000-0003-2525-1407), Emma B. Hodcroft (0000-0002-0078-2212)

Citation

Huddleston et al., (2021). Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. Journal of Open Source Software, 6(57), 2906, https://doi.org/10.21105/joss.02906

@article{Huddleston2021, doi = {10.21105/joss.02906}, url = {https://doi.org/10.21105/joss.02906}, year = {2021}, publisher = {The Open Journal}, volume = {6}, number = {57}, pages = {2906}, author = {Huddleston, John and Hadfield, James and Sibley, Thomas R. and Lee, Jover and Fay, Kairsten and Ilcisin, Misja and Harkins, Elias and Bedford, Trevor and Neher, Richard A. and Hodcroft, Emma B.}, title = {Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens}, journal = {Journal of Open Source Software} }
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bioinformatics molecular biology human pathogens evolutionary biology

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Journal of Open Source Software is an affiliate of the Open Source Initiative.

Journal of Open Source Software is part of Open Journals, which is a NumFOCUS-sponsored project.

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