JOSS Papers: molecular biology

All Papers
3919
 Published Papers
3372
 Active Papers
547
published Published over 1 year ago

primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other

Python
@dr-joe-wirth
10.21105/joss.06850
published Published over 1 year ago

dms-viz: Structure-informed visualiz ations for deep mutational scanning and other mutation-based datasets

JavaScript
@WillHannon-MCB
10.21105/joss.06129
published Published almost 2 years ago

Syn-CpG-Spacer: A Panel web app for synonymous recoding of viral genomes with CpG dinucleotides

Python
@oleksulkowski
10.21105/joss.06332
published Published about 4 years ago

pyrexMD: Workflow-Orientated Python Package for Replica Exchange Molecular Dynamics

Python
@ArtVoro
10.21105/joss.03325
published Published about 5 years ago

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

Python Perl
@huddlej
10.21105/joss.02906
published Published over 5 years ago

dms-view: Interactive visualization tool for deep mutational scanning data

Ruby JavaScript Python
@skhilton
10.21105/joss.02353
published Published over 5 years ago

taurenmd: A command-line interface for analysis of Molecular Dynamics simulations.

Python
@joaomcteixeira
10.21105/joss.02175
published Published about 6 years ago

BioSimSpace: An interoperable Python framework for biomolecular simulation

Python Jupyter Notebook
@lohedges
10.21105/joss.01831
published Published over 7 years ago

Python Implementation of Codon Adaptation Index

Python Jupyter Notebook
@benjamin-lee
10.21105/joss.00905
Displaying 9 papers

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