grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions

Rust Submitted 17 January 2025Published 30 June 2025
Review

Editor: @lpantano (all papers)
Reviewers: @Yaseswini (all reviews), @Ashastry2 (all reviews)

Authors

Nicholas D. Crosbie (0000-0002-0319-4248)

Citation

Crosbie, N. D., (2025). grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions. Journal of Open Source Software, 10(110), 8048, https://doi.org/10.21105/joss.08048

@article{Crosbie2025, doi = {10.21105/joss.08048}, url = {https://doi.org/10.21105/joss.08048}, year = {2025}, publisher = {The Open Journal}, volume = {10}, number = {110}, pages = {8048}, author = {Nicholas D. Crosbie}, title = {grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions}, journal = {Journal of Open Source Software} }
Copy citation string · Copy BibTeX  
Tags

FASTQ records regular expressions bioinformatics variants

Altmetrics
Markdown badge

 

License

Authors of JOSS papers retain copyright.

This work is licensed under a Creative Commons Attribution 4.0 International License.

Creative Commons License

Table of Contents
Public user content licensed CC BY 4.0 unless otherwise specified.
ISSN 2475-9066