PyBioPAX: biological pathway exchange in Python

Python Submitted 15 December 2021Published 11 March 2022

Editor: @majensen (all papers)
Reviewers: @dhimmel (all reviews), @leonweber (all reviews)


Benjamin M. Gyori (0000-0001-9439-5346), Charles Tapley Hoyt (0000-0003-4423-4370)


Gyori et al., (2022). PyBioPAX: biological pathway exchange in Python. Journal of Open Source Software, 7(71), 4136,

@article{Gyori2022, doi = {10.21105/joss.04136}, url = {}, year = {2022}, publisher = {The Open Journal}, volume = {7}, number = {71}, pages = {4136}, author = {Benjamin M. Gyori and Charles Tapley Hoyt}, title = {PyBioPAX: biological pathway exchange in Python}, journal = {Journal of Open Source Software} }
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systems biology biological pathways networks

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