Zarrtraj: A Python package for streaming molecular dynamics trajectories from cloud services

Python Jupyter Notebook Submitted 06 November 2024 • Published 02 May 2026
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Authors

Lawson Woods (0009-0003-0713-4167), Hugo MacDermott-Opeskin (0000-0002-7393-7457), Edis Jakupovic (0000-0001-8813-6356), Yuxuan Zhuang (0000-0003-4390-8556), Richard J. Gowers (0000-0002-3241-1846), Oliver Beckstein (0000-0003-1340-0831)

Citation

Woods et al., (2026). Zarrtraj: A Python package for streaming molecular dynamics trajectories from cloud services. Journal of Open Source Software, 11(121), 7943, https://doi.org/10.21105/joss.07943

@article{Woods2026, doi = {10.21105/joss.07943}, url = {https://doi.org/10.21105/joss.07943}, year = {2026}, publisher = {The Open Journal}, volume = {11}, number = {121}, pages = {7943}, author = {Woods, Lawson and MacDermott-Opeskin, Hugo and Jakupovic, Edis and Zhuang, Yuxuan and Gowers, Richard J. and Beckstein, Oliver}, title = {Zarrtraj: A Python package for streaming molecular dynamics trajectories from cloud services}, journal = {Journal of Open Source Software} }
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streaming molecular-dynamics file-format mdanalysis zarr

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This work is licensed under a Creative Commons Attribution 4.0 International License.

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Journal of Open Source Software is an affiliate of the Open Source Initiative.

Journal of Open Source Software is part of Open Journals, which is a NumFOCUS-sponsored project.

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ISSN 2475-9066