tag:joss.theoj.org,2005:/papers/tagged/whole-cell%20modelingJournal of Open Source Software2020-11-16T14:00:46ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/20252020-11-16T14:00:46Z2021-02-15T11:29:58ZDE-Sim: an object-oriented, discrete-event simulation tool for data-intensive modeling of complex systems in Pythonaccepted0.1.12020-09-09 23:42:08 UTC552020-11-16 14:00:46 UTC520202685ArthurP.GoldbergIcahn Institute for Data Science and Genomic Technology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA0000-0003-2772-1484JonathanR.KarrIcahn Institute for Data Science and Genomic Technology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA0000-0002-2605-508010.21105/joss.02685https://doi.org/10.5281/zenodo.4274852Python, Jupyter Notebook, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.02685.pdfdynamical modeling, simulation, discrete-event simulation, object-oriented simulation, parallel discrete-event simulation, biochemical modeling, whole-cell modeling