tag:joss.theoj.org,2005:/papers/tagged/web?page=3Journal of Open Source Software2020-11-15T18:51:20ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/10882020-11-15T18:51:20Z2021-02-15T11:32:00ZSODAR Core: a Django-based framework for scientific data management and analysis web appsacceptedv0.6.22019-07-02 14:31:24 UTC552020-11-15 18:51:20 UTC520201584MikkoNieminenBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178 Berlin0000-0002-4180-8810OliverStolpeBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178 Berlin0000-0002-8686-2941FranziskaSchumannBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178 Berlin0000-0002-1332-4894ManuelHoltgreweBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178 Berlin0000-0002-3051-1763DieterBeuleBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178 Berlin0000-0002-3284-063210.21105/joss.01584https://doi.org/10.5281/zenodo.4269347Python, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.01584.pdfscientific data management, django, framework, pythontag:joss.theoj.org,2005:Paper/20302020-11-01T11:43:48Z2021-02-15T11:29:57ZReorient: A Web tool for reorienting and cropping MRI data.acceptedv1.0.02020-09-11 17:35:48 UTC552020-11-01 11:43:48 UTC520202670KatjaHeuerCenter for Research and Interdisciplinarity, University of Paris, Max Planck Institute for Human Cognitive and Brain Sciences0000-0002-7237-0196RobertoToroCenter for Research and Interdisciplinarity, University of Paris, Institut Pasteur0000-0002-6671-858X10.21105/joss.02670https://doi.org/10.5281/zenodo.4165153JavaScripthttps://joss.theoj.org/papers/10.21105/joss.02670.pdfNeuroscience, Neuroanatomy, Neuroimaging, Nifti, Web tooltag:joss.theoj.org,2005:Paper/17462020-10-18T19:14:40Z2021-02-15T11:30:28ZViime: Visualization and Integration of Metabolomics Experimentsacceptedv0.1.02020-06-16 17:17:14 UTC542020-10-18 19:14:40 UTC520202410RoniChoudhuryKitware Inc.JonBeezleyKitware Inc.BrandonDavisKitware Inc.JaredTomeckKitware Inc.SamuelGratzlKitware Inc.LilianGolzarri-ArroyoDepartment of Epidemiology and Biostatistics, Indiana University School of Public HealthJunWanDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Department of BioHealth Informatics, Indiana University School of Informatics and ComputingDanielRafteryDepartment of Anesthesiology and Pain Medicine, University of WashingtonJeffBaumesKitware Inc.ThomasM.O'ConnellDepartment of Otolaryngology--Head and Neck Surgery, Indiana University School of Medicine10.21105/joss.02410https://doi.org/10.5281/zenodo.4086165R, JavaScript, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02410.pdfmetabolomics, visualization, web applicationtag:joss.theoj.org,2005:Paper/17492020-07-30T13:23:13Z2021-02-15T11:30:28Zhtmldate: A Python package to extract publication dates from web pagesacceptedv0.6.32020-06-17 15:27:02 UTC512020-07-30 13:23:13 UTC520202439AdrienBarbaresiBerlin-Brandenburg Academy of Sciences0000-0002-8079-869410.21105/joss.02439https://doi.org/10.5281/zenodo.3966235Pythonhttps://joss.theoj.org/papers/10.21105/joss.02439.pdfmetadata extraction, date parsing, web scraping, natural language processingtag:joss.theoj.org,2005:Paper/13902020-06-09T22:38:33Z2021-02-15T11:31:17ZEnhanced software and platform for the Town Energy Balance (TEB) modelaccepted4.0.02019-12-04 13:55:55 UTC502020-06-09 22:38:33 UTC520202008D.MeyerDepartment of Meteorology, University of Reading, Reading, UK, Department of Civil and Environmental Engineering, Imperial College London, London, UK0000-0002-7071-7547R.SchoetterCNRM UMR 3589, Université Fédérale de Toulouse, Météo-France/CNRS, Toulouse, France0000-0002-2284-4592V.MassonCNRM UMR 3589, Université Fédérale de Toulouse, Météo-France/CNRS, Toulouse, France0000-0001-8807-0545S.GrimmondDepartment of Meteorology, University of Reading, Reading, UK0000-0002-3166-941510.21105/joss.02008https://doi.org/10.5281/zenodo.3887081Fortran, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02008.pdfMeteorology, Energy, Urban, Energy Balance, HVACtag:joss.theoj.org,2005:Paper/15152020-03-09T19:33:00Z2021-02-15T11:30:59ZMaterialNet: A web-based graph explorer for materials science dataaccepted1.0.02020-02-13 14:28:49 UTC472020-03-09 19:33:00 UTC520202105RoniChoudhuryKitware Inc.MuratahanAykolToyota Research InstituteSamuelGratzlKitware Inc.JosephMontoyaToyota Research InstituteJensHummelshøjToyota Research Institute10.21105/joss.02105https://doi.org/10.5281/zenodo.3701759JavaScript, Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02105.pdfmaterials science, graph visualizationtag:joss.theoj.org,2005:Paper/14402020-01-22T18:51:16Z2021-02-15T11:31:08Zrefsplitr: Author name disambiguation, author georeferencing, and mapping of coauthorship networks with Web of Science dataacceptedv1.0.02020-01-14 19:42:14 UTC452020-01-22 18:51:16 UTC520202028AurielM.v.FournierPorzana Solutions, Marquette Heights, IL, 61554, USA0000-0002-8530-9968MatthewE.BoonePorzana Solutions, Marquette Heights, IL, 61554, USA0000-0002-8070-4715ForrestR.StevensDepartment of Geography & Geosciences, University of Louisville, Louisville, KY, 40292, USA0000-0002-9328-3753EmilioM.BrunaCenter for Latin American Studies, University of Florida, Gainesville, FL, 32611-5530, USA, Department of Wildlife Ecology & Conservation, University of Florida, Gainesville, FL, 32611-4430, USA0000-0003-3381-847710.21105/joss.02028https://doi.org/10.5281/zenodo.3608285Rhttps://joss.theoj.org/papers/10.21105/joss.02028.pdfname disambiguation, bibliometrics, coauthorship, collaboration, georeferencing, metascience, scientometrics, science of science, Web of Sciencetag:joss.theoj.org,2005:Paper/11202019-11-25T17:45:10Z2021-02-15T11:31:55ZVirtual Scanner: MRI on a Browseraccepted1.0.02019-07-22 14:21:18 UTC432019-11-25 17:45:10 UTC420191637GehuaTongColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0001-6263-762XSairamGeethanathColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0002-3776-4114MarinaMansoJimenoColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0002-1141-2049EnlinQianColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0001-7531-1274KeerthiSravanRaviColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0001-6886-0101NishikaGirishPlum Grove Junior High, Palatine, IL, USAJohnThomasVaughanColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, New York, NY, USA0000-0002-6933-375710.21105/joss.01637https://doi.org/10.5281/zenodo.3550315JavaScript, Pythonhttps://joss.theoj.org/papers/10.21105/joss.01637.pdfAccessible Magnetic Resonance Imaging, Web Application, Pulseqtag:joss.theoj.org,2005:Paper/11322019-10-30T20:19:29Z2021-02-15T11:31:53ZDscoreApp: An user-friendly web application for computing the Implicit Association Test D-scoreacceptedv1.0.02019-07-26 14:41:08 UTC422019-10-30 20:19:29 UTC420191764OttaviaM.EpifaniaDepartment of Philosophy, Sociology, Pedagogy and Applied Psychology, University of Padova (IT)0000-0001-8552-568XPasqualeAnselmiDepartment of Philosophy, Sociology, Pedagogy and Applied Psychology, University of Padova (IT)0000-0003-2982-7178EgidioRobustoDepartment of Philosophy, Sociology, Pedagogy and Applied Psychology, University of Padova (IT)10.21105/joss.01764https://doi.org/10.5281/zenodo.3523063Rhttps://joss.theoj.org/papers/10.21105/joss.01764.pdfShiny, Implicit Association Test, D-score, User-friendlytag:joss.theoj.org,2005:Paper/11662019-09-26T18:10:24Z2021-02-15T11:31:46ZLISC: A Python Package for Scientific Literature Collection and Analysisacceptedv0.1.02019-08-16 20:43:07 UTC412019-09-26 18:10:24 UTC420191674ThomasDonoghueDepartment of Cognitive Science, University of California, San Diego0000-0001-5911-047210.21105/joss.01674https://doi.org/10.5281/zenodo.3462035Pythonhttps://joss.theoj.org/papers/10.21105/joss.01674.pdfpython, literature analysis, text mining, web scraping, meta science, knowledge discovery, hypothesis generation, automated meta analysis, literature based discovery