tag:joss.theoj.org,2005:/papers/tagged/visualizationsJournal of Open Source Software2024-02-07T21:38:40ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/50552024-02-07T21:38:40Z2024-02-12T12:12:32ZHistoJS: Web-Based Analytical Tool for Advancing Multiplexed Imagesacceptedv1.0.02023-12-31 23:10:45 UTC942024-02-07 21:38:40 UTC920246317MohamedMasoudTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, United States of America0000-0002-5365-242XDavidGutmanDepartment of Pathology, Emory University School of Medicine, Atlanta, United States of America0000-0002-1386-8701SergeyPlisTri-institutional Center for Translational Research in Neuroimaging and Data Science (TReNDS), Georgia State University, Georgia Institute of Technology, Emory University, Atlanta, United States of America, Department of Computer Science, Georgia State University, Atlanta, United States of America0000-0003-0040-036510.21105/joss.06317https://doi.org/10.5281/zenodo.10626533Python, JavaScript, PHPhttps://joss.theoj.org/papers/10.21105/joss.06317.pdfVisualization, Web Machine Learning, Multiplexed Images, Spatial Biology, Single Celltag:joss.theoj.org,2005:Paper/45162024-01-31T19:53:10Z2024-02-01T00:00:26Zmpl-interactions: A Python Package for Interactive Matplotlib Figuresaccepted0.23.02023-05-31 18:05:51 UTC932024-01-31 19:53:10 UTC920245651IanHunt-IsaakJohn A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA0000-0002-7591-083XJohnRussellDepartment of Molecular and Cellular Biology, Harvard University, Cambridge, MA, USA0009-0002-0402-2306DoekeHekstraJohn A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA, Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA, USA0000-0003-2332-922310.21105/joss.05651https://doi.org/10.5281/zenodo.10211397Pythonhttps://joss.theoj.org/papers/10.21105/joss.05651.pdfMatplotlib, Ipywidgets, Interactive, Visualizationtag:joss.theoj.org,2005:Paper/48382024-01-22T15:00:12Z2024-01-23T11:55:19Zcstag and cstag-cli: tools for manipulating and visualizing cs tagsacceptedv1.0.42023-10-06 03:25:34 UTC932024-01-22 15:00:12 UTC920246066AkihiroKunoDepartment of Anatomy and Embryology, University of Tsukuba, Tsukuba, Ibaraki, Japan, Laboratory Animal Resource Center, Trans-border Medical Research Center, University of Tsukuba, Tsukuba, Ibaraki, Japan.0000-0002-4674-688210.21105/joss.06066https://doi.org/10.5281/zenodo.10544838Pythonhttps://joss.theoj.org/papers/10.21105/joss.06066.pdfpython, genomics, sequencing, bioinformaticstag:joss.theoj.org,2005:Paper/48632023-12-19T12:19:57Z2024-01-11T16:55:09ZMiscMetabar: an R package to facilitate visualization and reproducibility in metabarcoding analysisacceptedv0.52023-10-23 15:45:54 UTC922023-12-19 12:19:57 UTC820236038AdrienTaudièreIdEst, Saint-Bonnet-de-Salendrinque, 30460 France0000-0003-1088-118210.21105/joss.06038https://doi.org/10.5281/zenodo.10370781Rhttps://joss.theoj.org/papers/10.21105/joss.06038.pdfBioinformatic, Metagenomics, Barcoding, Reproducibilitytag:joss.theoj.org,2005:Paper/47302023-12-14T13:35:00Z2023-12-15T03:02:03Zlys: interactive multi-dimensional data analysis and visualization platformacceptedv0.3.22023-09-02 03:52:46 UTC922023-12-14 13:35:00 UTC820235869AsukaNakamuraRIKEN Center for Emergent Matter Science, Japan0000-0002-3010-947510.21105/joss.05869https://doi.org/10.5281/zenodo.10241638Pythonhttps://joss.theoj.org/papers/10.21105/joss.05869.pdfdask, matplotlib, multi-dimensional datatag:joss.theoj.org,2005:Paper/44622023-11-01T16:34:42Z2023-11-02T00:00:44ZGGoutlieR: an R package to identify and visualize unusual geo-genetic patterns of biological samplesacceptedv1.0.02023-05-01 13:29:12 UTC912023-11-01 16:34:42 UTC820235687Che-WeiChangUniversity of Hohenheim, Stuttgart, Germany0000-0001-6704-3732KarlSchmidUniversity of Hohenheim, Stuttgart, Germany0000-0001-5129-895X10.21105/joss.05687https://doi.org/10.6084/m9.figshare.24438388Rhttps://joss.theoj.org/papers/10.21105/joss.05687.pdflandscape genomics, K nearest neighbors, geo-genetic patternstag:joss.theoj.org,2005:Paper/45542023-10-11T14:46:43Z2023-10-12T07:07:47ZlavaanExtra: Convenience Functions for Package lavaanaccepted0.1.62023-06-20 18:07:39 UTC902023-10-11 14:46:43 UTC820235701RémiThériaultDepartment of Psychology, Université du Québec à Montréal, Québec, Canada0000-0003-4315-678810.21105/joss.05701https://doi.org/10.5281/zenodo.8421873Rhttps://joss.theoj.org/papers/10.21105/joss.05701.pdfpsychology, statistics, visualization, structural equation modelingtag:joss.theoj.org,2005:Paper/41662023-09-02T03:38:07Z2023-09-03T00:01:31ZClustergram: Visualization and diagnostics for cluster analysisacceptedv0.7.02023-01-16 21:45:48 UTC892023-09-02 03:38:07 UTC820235240MartinFleischmannDepartment of Social Geography and Regional Development, Charles University0000-0003-3319-336610.21105/joss.05240https://doi.org/10.5281/zenodo.8202396Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.05240.pdfclustering, unsupervised classification, data explorationtag:joss.theoj.org,2005:Paper/42252023-07-31T22:44:21Z2023-08-01T00:01:14ZViMag: A Visual Vibration Analysis Toolboxacceptedv0.1.62023-02-21 08:49:46 UTC872023-07-31 22:44:21 UTC820235491RicardLado-RoigéIQS School of Engineering, Universitat Ramon Llull, Via Augusta 390, 08017 Barcelona, Spain0000-0002-6421-7351MarcoA.PérezIQS School of Engineering, Universitat Ramon Llull, Via Augusta 390, 08017 Barcelona, Spain0000-0003-4140-182310.21105/joss.05491https://doi.org/10.5281/zenodo.8199675JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05491.pdfdeep-learning, modal analysis, condition monitoring, structural health monitoring, motion magnificationtag:joss.theoj.org,2005:Paper/43042023-07-25T13:47:54Z2023-07-26T00:01:19Zrempsyc: Convenience functions for psychologyacceptedv0.1.1.22023-03-13 20:45:09 UTC872023-07-25 13:47:54 UTC820235466RémiThériaultDepartment of Psychology, Université du Québec à Montréal, Québec, Canada0000-0003-4315-678810.21105/joss.05466https://doi.org/10.5281/zenodo.8169295Rhttps://joss.theoj.org/papers/10.21105/joss.05466.pdfpsychology, statistics, visualization