tag:joss.theoj.org,2005:/papers/tagged/subsamplingJournal of Open Source Software2022-12-20T18:18:35ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/33152022-12-20T18:18:35Z2022-12-21T00:01:08Zsmot: a python package and CLI tool for contextual phylogenetic subsamplingacceptedv0.17.32022-02-01 21:37:45 UTC802022-12-20 18:18:35 UTC720224193ZebulunW.ArendseeVirus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA0000-0002-5833-798XAmyL. VincentBakerVirus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA0000-0002-4953-7285TavisK.AndersonVirus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA0000-0002-3138-553510.21105/joss.04193https://doi.org/10.5281/zenodo.7458325Pythonhttps://joss.theoj.org/papers/10.21105/joss.04193.pdfphylogenetics, subsampling, influenzatag:joss.theoj.org,2005:Paper/31122022-01-29T00:57:26Z2022-01-30T00:01:13ZRasusa: Randomly subsample sequencing reads to a specified coverageaccepted0.6.02021-10-18 02:52:22 UTC692022-01-29 00:57:26 UTC720223941MichaelB.HallEuropean Molecular Biology Laboratory, European Bioinformatics Institute EMBL-EBI, Hinxton, UK0000-0003-3683-620810.21105/joss.03941https://doi.org/10.5281/zenodo.5895111Rusthttps://joss.theoj.org/papers/10.21105/joss.03941.pdfbioinformatics, genomics, fastq, fasta, subsampling, randomtag:joss.theoj.org,2005:Paper/1212017-03-29T00:00:00Z2021-02-15T11:34:20ZEffective-Quadratures (EQ): Polynomials for Computational Engineering Studiesacceptedv3.02016-11-23 14:08:34 UTC112017-03-29 00:00:00 UTC22017166PranaySeshadriUniversity of Cambridge0000-0002-7351-012XGeoffreyParksUniversity of Cambridge0000-0001-8188-504710.21105/joss.00166https://doi.org/10.5281/zenodo.438320Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.00166.pdfeffective quadrature subsampling, tensor and sparse grids, uncertainty quantification, surrogate modelling, polynomial interpolation and approximation