tag:joss.theoj.org,2005:/papers/tagged/stabilityJournal of Open Source Software2023-03-08T10:00:40ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/40142023-03-08T10:00:40Z2023-03-09T00:04:46ZPersistable: persistent and stable clusteringaccepted0.3.22022-11-18 23:32:58 UTC832023-03-08 10:00:40 UTC820235022LuisScoccolaNortheastern University0000-0002-4862-722XAlexanderRolleTechnical University of Munich10.21105/joss.05022https://doi.org/10.5281/zenodo.7697173Python, Cythonhttps://joss.theoj.org/papers/10.21105/joss.05022.pdfclustering, unsupervised learning, machine learning, topological data analysistag:joss.theoj.org,2005:Paper/32332022-03-22T19:48:42Z2022-10-11T06:57:26ZQDistRnd: A GAP package for computing the distance of quantum error-correcting codesaccepted0.7.02021-12-01 22:20:16 UTC712022-03-22 19:48:42 UTC720224120LeonidP.PryadkoDepartment of Physics & Astronomy, University of California, Riverside, California, 92521 USA, The Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 Russia0000-0002-4990-0259VadimA.ShabashovThe Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 RussiaValeriiK.KozinDepartment of Physics, University of Basel, Klingelbergstrasse 82, CH-4056 Basel, Switzerland, The Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 Russia10.21105/joss.04120https://doi.org/10.5281/zenodo.6374733GAPhttps://joss.theoj.org/papers/10.21105/joss.04120.pdfQuantum Error Correction, QECC, Quantum Error-Correcting Code, Qudit code, quantum stabilizer code, CSS codetag:joss.theoj.org,2005:Paper/31462022-01-12T22:41:39Z2022-01-23T18:41:48ZVeridicalFlow: a Python package for building trustworthy data science pipelines with PCSacceptedv0.0.22021-11-01 23:30:20 UTC692022-01-12 22:41:39 UTC720223895JamesDuncanStatistics Department, University of California, Berkeley0000-0003-3297-681XRushKapoorEECS Department, University of California, BerkeleyAbhineetAgarwalPhysics Department, University of California, BerkeleyChandanSinghEECS Department, University of California, Berkeley0000-0003-0318-2340BinYuStatistics Department, University of California, Berkeley, EECS Department, University of California, Berkeley10.21105/joss.03895https://doi.org/10.5281/zenodo.5841669Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.03895.pdfpython, stability, reproducibility, data science, cachingtag:joss.theoj.org,2005:Paper/26912021-08-25T13:40:20Z2021-08-26T00:00:44ZSummationByPartsOperators.jl: A Julia library of provably stable discretization techniques with mimetic propertiesacceptedv0.5.12021-05-25 06:00:07 UTC642021-08-25 13:40:20 UTC620213454HendrikRanochaApplied Mathematics Münster, University of Münster, Germany0000-0002-3456-227710.21105/joss.03454https://doi.org/10.5281/zenodo.5226913Julia, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.03454.pdfnumerical analysis, differential equations, summation-by-parts, energy stability, finite differences, discontinuous Galerkin methods, Fourier collocation methodstag:joss.theoj.org,2005:Paper/21972021-05-01T07:30:56Z2021-05-02T00:01:18ZIsoreader: An R package to read stable isotope data files for reproducible researchacceptedv1.2.72020-11-20 23:03:31 UTC612021-05-01 07:30:56 UTC620212878SebastianKopfDepartment of Geological Sciences, University of Colorado Boulder, Colorado, USA0000-0002-2044-0201BrettDavidheiser-KrollDepartment of Geological Sciences, University of Colorado Boulder, Colorado, USA0000-0002-6153-7851IljaKockenDepartment of Earth Sciences, Utrecht University, the Netherlands0000-0003-2196-871810.21105/joss.02878https://doi.org/10.5281/zenodo.4724083Rhttps://joss.theoj.org/papers/10.21105/joss.02878.pdfstable isotopes, earth science, ecology, isotope ratio mass spectrometry, reproducible researchtag:joss.theoj.org,2005:Paper/22262021-03-31T15:41:29Z2021-04-01T07:34:56Zstabm: Stability Measures for Feature Selectionaccepted1.1.42020-12-09 07:40:30 UTC592021-03-31 15:41:29 UTC620213010AndreaBommertFaculty of Statistics, TU Dortmund University, 44221 Dortmund, Germany0000-0002-1005-9351MichelLangFaculty of Statistics, TU Dortmund University, 44221 Dortmund, Germany0000-0001-9754-039310.21105/joss.03010https://doi.org/10.5281/zenodo.4648087Rhttps://joss.theoj.org/papers/10.21105/joss.03010.pdffeature selection stability, stability measures, similarity measurestag:joss.theoj.org,2005:Paper/18682020-10-30T19:17:32Z2021-02-15T11:30:15ZRK-Opt: A package for the design of numerical ODE solversacceptedv1.0.02020-07-21 06:05:44 UTC542020-10-30 19:17:32 UTC520202514DavidI.KetchesonKing Abdullah University of Science and Technology, Saudi Arabia0000-0002-1212-126XMatteoParsaniKing Abdullah University of Science and Technology, Saudi Arabia0000-0001-7300-1280ZacharyJ.GrantOak Ridge National Laboratory, USA0000-0002-1293-4770AronJ.AhmadiaCapital One, USA0000-0002-2573-2481HendrikRanochaKing Abdullah University of Science and Technology, Saudi Arabia0000-0002-3456-227710.21105/joss.02514https://doi.org/10.5281/zenodo.4146740Matlab, Mathematica, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02514.pdfnumerical analysis, differential equations, Runge-Kutta method, linear multistep method, strong stability preservation, absolute stabilitytag:joss.theoj.org,2005:Paper/19952020-10-26T00:01:42Z2022-12-15T10:48:56ZMoran Pycess: a Python package to simulate Moran processes driven by game theoryacceptedv1.0.02020-08-29 13:05:34 UTC542020-10-26 00:01:42 UTC520202643MaciejBakBiozentrum, University of Basel, Swiss Institute of Bioinformatics0000-0003-1361-7301AnnaM.RozlachFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University0000-0002-5195-429910.21105/joss.02643https://doi.org/10.5281/zenodo.4114143Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02643.pdfMoran Process, evolutionary stable strategy, evolutionary game theorytag:joss.theoj.org,2005:Paper/15292020-04-17T15:10:52Z2021-02-15T11:30:56ZMatching: A Python library for solving matching gamesacceptedv1.2.12020-02-28 13:00:23 UTC482020-04-17 15:10:52 UTC520202169HenryWildeSchool of Mathematics, Cardiff University0000-0002-3788-7691VincentKnightSchool of Mathematics, Cardiff University0000-0002-4245-0638JonathanGillardSchool of Mathematics, Cardiff University0000-0001-9166-298X10.21105/joss.02169https://doi.org/10.5281/zenodo.3755304Pythonhttps://joss.theoj.org/papers/10.21105/joss.02169.pdfmathematics, economics, computer science, game theory, stabilitytag:joss.theoj.org,2005:Paper/1702017-08-27T00:00:00Z2021-02-15T11:34:12ZVaristran: Anscombe's variance stabilizing transformation for RNA-seq gene expression dataacceptedv1.0.12017-03-13 04:38:01 UTC162017-08-27 00:00:00 UTC22017257PaulFrancisHarrisonMonash Bioinformatics Platform, Monash University0000-0002-3980-268X10.21105/joss.00257https://doi.org/10.5281/zenodo.846925Rhttps://joss.theoj.org/papers/10.21105/joss.00257.pdfRNA-seq, gene expression, variance stabilizing transformation, R package