tag:joss.theoj.org,2005:/papers/tagged/small%20moleculesJournal of Open Source Software2021-11-12T21:11:08ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/30602021-11-12T21:11:08Z2021-11-13T00:00:35ZA flexible search system for high-accuracy identification of biological entities and moleculesaccepted0.6.02021-09-10 18:06:43 UTC672021-11-12 21:11:08 UTC620213756MaxFranzThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0003-0169-0480JeffreyV.WongThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0002-8912-5699MetinCanSiperComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-7556-093XChristianDallagoDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Systems Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Informatics, Technische Universität München, 85748 Garching, Germany0000-0003-4650-6181JohnGiorgiThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0001-9621-5046EmekDemirComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-3663-7113ChrisSanderDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, 02215, USA, Broad Institute of MIT and Harvard, Boston, MA, 02142, USA0000-0001-6059-6270GaryD.BaderThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada, Department of Computer Science, University of Toronto, Ontario, M5S 2E4, Canada, Department of Molecular Genetics, University of Toronto, Ontario, M5S 1A8, Canada, The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, M5G 1X5, Canada, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, M5G 2C1, Canada0000-0003-0185-886110.21105/joss.03756https://doi.org/10.5281/zenodo.4891545JavaScripthttps://joss.theoj.org/papers/10.21105/joss.03756.pdfbiological entities, small molecules, grounding, identifiers, identification, search, Docker