published Published about 15 hours ago
Pynteny: a Python package to perform synteny-aware, profile HMM-based searches in sequence databases
Dockerfile Python
@Robaina
published Published 5 months ago
btllib: A C++ library with Python interface for efficient genomic sequence processing
Python C R
@vlad0x00
published Published 6 months ago
VPsearch: fast exact sequence similarity search for genomic sequences
Dockerfile Python Cython C++
@jvkersch
published Published 8 months ago
Magphi: Sequence extraction tool from FASTA and GFF3 files using seed pairs
Dockerfile Python
@milnus
published Published 11 months ago
ROCK: digital normalization of whole genome sequencing data
M4 C++
@alex2cris
published Published about 1 year ago
helayo: Reconstructing Sanskrit texts from manuscript witnesses
Haskell JavaScript XSLT
@chchch
published Published about 1 year ago
Rasusa: Randomly subsample sequencing reads to a specified coverage
Rust
@mbhall88
published Published about 1 year ago
Bam-readcount - rapid generation of basepair-resolution sequence metrics
R
@chrisamiller
published Published over 1 year ago
Nextclade: clade assignment, mutation calling and quality control for viral genomes
Ruby C++
@rneher
published Published almost 2 years ago
@neuromusic
