JOSS Papers: sequence

All Papers
3948
 Published Papers
3410
 Active Papers
538
published Published 20 days ago

QMCPy: A Python Framework for (Quasi-)Monte Carlo Algorithms

Python C
@alegresor
10.21105/joss.09705
published Published about 1 month ago

Blini: lightweight nucleotide sequence search and dereplication

Go Python
@fluhus
10.21105/joss.09494
published Published 6 months ago

Gene Fetch: A Python tool for sequence retrieval from GenBank across the tree of life

Python
@SchistoDan
10.21105/joss.08456
published Published 7 months ago

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions

Rust
@Rbfinch
10.21105/joss.08048
published Published 8 months ago

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences

Python Jupyter Notebook
@GavinHuttley
10.21105/joss.07765
published Published 9 months ago

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files.

Python Nextflow Groovy
@abhi18av
10.21105/joss.07608
published Published over 1 year ago

Pycashier: cash in on DNA barcode tags

Python
@daylinmorgan
10.21105/joss.06891
published Published over 1 year ago

lintsampler: Easy random sampling via linear interpolation

Python
@aneeshnaik
10.21105/joss.06906
published Published over 1 year ago

Back to sequences: Find the origin of k-mers

Python Rust
@pierrepeterlongo
10.21105/joss.07066
published Published over 1 year ago

universalmotif: An R package for biological motif analysis

R C++ C
@bjmt
10.21105/joss.07012
Displaying papers 1 - 10 of 59 in total

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