tag:joss.theoj.org,2005:/papers/tagged/science%20dataJournal of Open Source Software2024-02-23T15:40:17ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/47752024-02-23T15:40:17Z2024-02-24T00:03:16Zstemflow: A Python Package for Adaptive Spatio-Temporal Exploratory Modelacceptedv1.0.02023-09-21 07:39:41 UTC942024-02-23 15:40:17 UTC920246158YangkangChenKey Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China, University of Chinese Academy of Sciences, Beijing, ChinaZhongruGuKey Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China, Cardiff University-Institute of Zoology Joint Laboratory for Biocomplexity Research, Chinese Academy of Sciences, Beijing, ChinaXiangjiangZhanKey Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China, University of Chinese Academy of Sciences, Beijing, China, Cardiff University-Institute of Zoology Joint Laboratory for Biocomplexity Research, Chinese Academy of Sciences, Beijing, China, Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming, China10.21105/joss.06158https://doi.org/10.6084/m9.figshare.24669132Pythonhttps://joss.theoj.org/papers/10.21105/joss.06158.pdfecology, spatio-temporal big data, citizen science, modeling, seasonal migrationtag:joss.theoj.org,2005:Paper/44452024-01-23T12:00:48Z2024-01-24T00:01:21ZFoundry-ML - Software and Services to Simplify Access to Machine Learning Datasets in Materials Scienceacceptedv0.5.12023-04-21 18:46:52 UTC932024-01-23 12:00:48 UTC920245467KjSchmidtGlobus, University of Chicago, Chicago, IL, United States of America, Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America0000-0002-9373-0058AristanaScourtasGlobus, University of Chicago, Chicago, IL, United States of America, Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America0000-0002-3917-605XLoganWardData Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America0000-0002-1323-5939SteveWangenData Science Institute, University of Wisconsin-Madison, Madison, WI, United States of AmericaMarcusSchwartingDepartment of Computer Science, University of Chicago, Chicago, IL, United States of America0000-0001-6817-7265IsaacDarlingDepartment of Computer Science, University of Chicago, Chicago, IL, United States of AmericaEthanTrueloveDepartment of Computer Science, University of Chicago, Chicago, IL, United States of AmericaAaditAmbadkarGlobus, University of Chicago, Chicago, IL, United States of AmericaRibhavBoseGlobus, University of Chicago, Chicago, IL, United States of AmericaZoaKatokGlobus, University of Chicago, Chicago, IL, United States of AmericaJingruiWeiDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of AmericaXiangguoLiDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of AmericaRyanJacobsDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of America0000-0003-2229-6730LaneSchultzDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of AmericaDoyeonKimDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of AmericaMichaelFerrisDepartment of Computer Science, University of Wisconsin-Madison, Madison, WI, United States of America0000-0002-7652-6776PaulM.VoylesDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of America0000-0001-9438-4284DaneMorganDepartment of Materials Science and Engineering, University of Wisconsin-Madison, Madison, WI, United States of America0000-0002-4911-0046IanFosterGlobus, University of Chicago, Chicago, IL, United States of America, Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America, Department of Computer Science, University of Chicago, Chicago, IL, United States of America0000-0003-2129-5269BenBlaiszikGlobus, University of Chicago, Chicago, IL, United States of America, Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America0000-0002-5326-490210.21105/joss.05467https://doi.org/10.5281/zenodo.10494644Pythonhttps://joss.theoj.org/papers/10.21105/joss.05467.pdfMachine Learning, Artificial Intelligence, Materials Science, Datatag:joss.theoj.org,2005:Paper/43632023-10-15T06:24:40Z2023-10-16T10:44:49ZNOMAD: A distributed web-based platform for managing materials science research dataacceptedv1.1.82023-03-24 09:37:47 UTC902023-10-15 06:24:40 UTC820235388MarkusScheidgenDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-8038-2277LauriHimanenDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-3130-8193AlvinNoeLadinesDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0003-0077-2097DavidSikterDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-2102-7160MohammadNakhaeeDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0003-4146-0129ÁdámFeketeDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-6263-897XTheodoreChangDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-4911-0230AmirGolparvarDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-2412-6615JoséA.MárquezDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-8173-2566SandorBrockhauserDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-9700-4803SebastianBrücknerLeibniz Institut für Kristallzüchtung, Berlin, Germany0000-0002-5969-847XLucaM.GhiringhelliDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0001-5099-3029FelixDietrichSchool of Computation, Information and Technology, Technical University of Munich, Munich, Germany0000-0002-2906-1769DanielLehmbergSchool of Computation, Information and Technology, Technical University of Munich, Munich, Germany0000-0002-4012-5014TheaDenellDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0009-0000-7185-9363AndreaAlbinoDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0001-9280-7431HampusNäsströmDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-3264-1692SherjeelShabihDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0009-0008-6635-4465FlorianDobenerDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0003-1987-6224MarkusKühbachDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-7117-5196RubelMozumderDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0009-0007-5926-6646JosephF.RudzinskiDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0003-3403-640XNathanDaelmanDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-7647-1816JoséM.PizarroDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-6751-8192MartinKubanDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-1619-2460CuauhtemocSalazarDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0002-9635-5062PavelOndračkaDepartment of Plasma Physics and Technology, Masaryk University, Brno, Czech Republic0000-0003-0729-629XHans-JoachimBungartzSchool of Computation, Information and Technology, Technical University of Munich, Munich, Germany0000-0002-0171-0712ClaudiaDraxlDepartment of Physics, Humboldt-Universität zu Berlin, Berlin, Germany0000-0003-3523-665710.21105/joss.05388https://doi.org/10.5281/zenodo.8366163https://joss.theoj.org/papers/10.21105/joss.05388.pdfPython, javascript, database, materials science, data management, electronic lab notebook, FAIRtag:joss.theoj.org,2005:Paper/42952023-06-21T19:36:56Z2023-06-22T00:01:24ZSarracen: a Python package for analysis and visualization of smoothed particle hydrodynamics dataacceptedv1.1.02023-03-09 19:28:13 UTC862023-06-21 19:36:56 UTC820235263AndrewHarrisMemorial University of Newfoundland, CanadaTerrenceS.TriccoMemorial University of Newfoundland, Canada0000-0002-6238-909610.21105/joss.05263https://doi.org/10.5281/zenodo.8034448Pythonhttps://joss.theoj.org/papers/10.21105/joss.05263.pdfJupyter Notebook, smoothed particle hydrodynamics, astronomy, astrophysics, data visualization, data sciencetag:joss.theoj.org,2005:Paper/33942023-05-08T14:20:35Z2023-05-09T00:01:32ZClimate variability indices for ecological and crop models in R: the climatrends packageacceptedv0.22022-02-23 15:55:36 UTC852023-05-08 14:20:35 UTC820234405Kauêde SousaDepartment of Agricultural Sciences, Inland Norway University of Applied Sciences, Hamar, Norway, Digital Inclusion, Bioversity International, Montpellier, France0000-0002-7571-7845Jacobvan EttenDigital Inclusion, Bioversity International, Montpellier, France0000-0001-7554-2558MagneNebyDepartment of Agricultural Sciences, Inland Norway University of Applied Sciences, Hamar, Norway0000-0003-2098-7650SveinØ.SolbergDepartment of Agricultural Sciences, Inland Norway University of Applied Sciences, Hamar, Norway0000-0002-4491-448310.21105/joss.04405https://doi.org/10.5281/zenodo.7884366Rhttps://joss.theoj.org/papers/10.21105/joss.04405.pdfclimate data, climatology, earth science, precipitation data, reproducibility, weather datatag:joss.theoj.org,2005:Paper/39502023-03-09T21:41:24Z2023-03-10T00:04:45ZOpenMSIStream: A Python package for facilitating integration of streaming data in diverse laboratory environmentsacceptedv1.0.02022-10-07 21:45:41 UTC832023-03-09 21:41:24 UTC820234896MargaretEminizerInstitute for Data Intensive Engineering and Science (IDIES), The Johns Hopkins University, USA0000-0003-4591-2225SamTabriskyDepartment of Biology, Dartmouth College, USA, Department of Computer Science, Dartmouth College, USA, Hopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USAAmirSharifzadehInstitute for Data Intensive Engineering and Science (IDIES), The Johns Hopkins University, USA0000-0002-4100-4898ChristopherDiMarcoHopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA0000-0002-2267-938XJacobM.DiamondHopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA, Department of Mechanical Engineering, The Johns Hopkins University, USA0000-0001-7905-4260K.t.RameshHopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA0000-0003-2659-4698ToddC.HufnagelHopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA, Department of Materials Science and Engineering, The Johns Hopkins University, USA, Department of Mechanical Engineering, The Johns Hopkins University, USA0000-0002-6373-9377TyrelM.McQueenHopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA, Department of Materials Science and Engineering, The Johns Hopkins University, USA, Department of Chemistry, The Johns Hopkins University, USA, Institute for Quantum Matter (IQM), William H. Miller III Department of Physics and Astronomy, The Johns Hopkins University, USA0000-0002-8493-4630DavidElbertInstitute for Data Intensive Engineering and Science (IDIES), The Johns Hopkins University, USA, Hopkins Extreme Materials Institute (HEMI), The Johns Hopkins University, USA0000-0002-2292-180X10.21105/joss.04896https://doi.org/10.5281/zenodo.7713196Pythonhttps://joss.theoj.org/papers/10.21105/joss.04896.pdfdata streaming, science data, Apache Kafka, materials sciencetag:joss.theoj.org,2005:Paper/34642022-07-07T21:09:23Z2022-07-10T08:52:23ZNAIF PDS4 Bundler: A Python package to generate SPICE PDS4 archivesacceptedv1.1.02022-04-11 22:46:02 UTC752022-07-07 21:09:23 UTC720224327MarcCostaSitjaJet Propulsion Laboratory, California Institute of Technology, USA0000-0003-0055-295910.21105/joss.04327https://doi.org/10.5281/zenodo.6800348Python, Tcl, HCL, XChttps://joss.theoj.org/papers/10.21105/joss.04327.pdfplanetary science, data archive, SPICE, geometry, navigationtag:joss.theoj.org,2005:Paper/36472022-07-06T15:37:27Z2022-07-07T00:01:02Zstacks: Stacked Ensemble Modeling with Tidy Data Principlesacceptedv0.2.32022-06-08 16:51:58 UTC752022-07-06 15:37:27 UTC720224471SimonP.CouchRStudio PBC0000-0001-5676-5107MaxKuhnRStudio PBC10.21105/joss.04471https://doi.org/10.5281/zenodo.6800026Rhttps://joss.theoj.org/papers/10.21105/joss.04471.pdfdata science, tidyverse, model stacking, ensemblingtag:joss.theoj.org,2005:Paper/31462022-01-12T22:41:39Z2022-01-23T18:41:48ZVeridicalFlow: a Python package for building trustworthy data science pipelines with PCSacceptedv0.0.22021-11-01 23:30:20 UTC692022-01-12 22:41:39 UTC720223895JamesDuncanStatistics Department, University of California, Berkeley0000-0003-3297-681XRushKapoorEECS Department, University of California, BerkeleyAbhineetAgarwalPhysics Department, University of California, BerkeleyChandanSinghEECS Department, University of California, Berkeley0000-0003-0318-2340BinYuStatistics Department, University of California, Berkeley, EECS Department, University of California, Berkeley10.21105/joss.03895https://doi.org/10.5281/zenodo.5841669Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.03895.pdfpython, stability, reproducibility, data science, cachingtag:joss.theoj.org,2005:Paper/26832021-10-12T08:09:27Z2021-10-13T00:01:45ZNominally: A Name Parser for Record Linkageacceptedv1.1.02021-05-19 23:05:56 UTC662021-10-12 08:09:27 UTC620213440MatthewVanEseltineInstitute for Social Research, University of Michigan0000-0002-9520-136010.21105/joss.03440https://doi.org/10.5281/zenodo.5562628Pythonhttps://joss.theoj.org/papers/10.21105/joss.03440.pdfdata science, record linkage, entity resolution, name parsing