tag:joss.theoj.org,2005:/papers/tagged/scanning?page=2Journal of Open Source Software2019-10-17T20:44:29ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/11882019-10-17T20:44:29Z2021-02-15T11:31:42ZMiSTree: a Python package for constructing and analysing Minimum Spanning Treesacceptedv1.02019-08-27 03:20:49 UTC422019-10-17 20:44:29 UTC420191721KrishnaNaidooDepartment of Physics \& Astronomy, University College London, Gower Street, London, WC1E 6BT, UK0000-0002-9182-180210.21105/joss.01721https://doi.org/10.5281/zenodo.3495008Python, Fortran, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.01721.pdfastronomy, cosmology, graphstag:joss.theoj.org,2005:Paper/10012019-08-16T12:21:21Z2021-02-15T11:32:11Zmultimatch-gaze: The MultiMatch algorithm for gaze path comparison in Pythonacceptedv0.1.12019-05-17 10:32:19 UTC402019-08-16 12:21:21 UTC420191525AdinaS.WagnerInstitute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Centre Jülich, Jülich, Germany0000-0003-2917-3450YaroslavO.HalchenkoDepartment of Psychological and Brain Sciences, Dartmouth College, Dartmouth, NH, United States0000-0003-3456-2493MichaelHankeInstitute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Centre Jülich, Jülich, Germany, Institute of Systems Neuroscience, Medical Faculty, Heinrich Heine University Düsseldorf, Düsseldorf, Germany0000-0001-6398-637010.21105/joss.01525https://doi.org/10.5281/zenodo.3369531Pythonhttps://joss.theoj.org/papers/10.21105/joss.01525.pdfeyetracking, scan path, fixation, saccadetag:joss.theoj.org,2005:Paper/5932018-12-11T12:39:04Z2021-02-15T11:33:05Zidpflex: Analysis of Intrinsically Disordered Proteins by Comparing Simulations to Small Angle Scattering Experimentsacceptedv0.1.52018-08-15 15:39:58 UTC322018-12-11 12:39:04 UTC320181007JoseM.BorregueroNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge TN, USA0000-0002-0866-8158FahimaIslamNeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge TN, USA0000-0002-0265-0256UtsabR.ShresthaBiosciences Division, Oak Ridge National Laboratory, Oak Ridge TN, USA.0000-0001-6985-6657LoukasPetridisBiosciences Division, Oak Ridge National Laboratory, Oak Ridge TN, USA.0000-0001-8569-060X10.21105/joss.01007https://doi.org/10.5281/zenodo.2179293Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.01007.pdfsans, neutron scattering, saxs, intrinsically disoreded proteins, simulations, molecular dynamicstag:joss.theoj.org,2005:Paper/2862018-05-09T14:48:33Z2021-02-15T11:33:53Zscanstatistics: space-time anomaly detection using scan statisticsacceptedv1.0.02017-09-22 14:43:47 UTC252018-05-09 14:48:33 UTC32018515BenjaminAlléviusDepartment of Mathematics, Stockholm University0000-0002-0927-718310.21105/joss.00515https://doi.org/10.5281/zenodo.1242982R, C++, Chttps://joss.theoj.org/papers/10.21105/joss.00515.pdfscan statistic, cluster detection, anomaly detection, spatiotemporaltag:joss.theoj.org,2005:Paper/2232017-12-07T16:24:14Z2021-02-15T11:34:03Zdms2dfe: Comprehensive Workflow for Analysis of Deep Mutational Scanning Dataacceptedv1.0.62017-07-06 09:56:08 UTC202017-12-07 16:24:14 UTC22017362RohanDandageCSIR-Institute of Genomics and Integrative Biology, New Delhi, India.0000-0002-6421-2067KausikChakrabortyCSIR-Institute of Genomics and Integrative Biology, New Delhi, India.0000-0001-6000-837910.21105/joss.00362https://doi.org/10.5281/zenodo.1095257Python, Rhttps://joss.theoj.org/papers/10.21105/joss.00362.pdfdeep sequencing, mutationstag:joss.theoj.org,2005:Paper/2292017-09-20T00:00:00Z2021-02-15T11:34:02ZmcMST: A Toolbox for the Multi-Criteria Minimum Spanning Tree Problemacceptedv1.0.02017-07-11 23:03:06 UTC172017-09-20 00:00:00 UTC22017374JakobBossekUniversity of Münster0000-0002-4121-466810.21105/joss.00374https://doi.org/10.5281/zenodo.894402Rhttps://joss.theoj.org/papers/10.21105/joss.00374.pdfcombinatorial optimization, evolutionary algorithms, multi-objective optimizationtag:joss.theoj.org,2005:Paper/1312017-02-13T00:00:00Z2021-02-15T11:34:19ZSlicerITKUltrasound: A 3D Slicer extension for scan conversion of B-mode and next-generation ultrasound imaging modalitiesacceptedv0.2.02016-12-16 15:23:58 UTC102017-02-13 00:00:00 UTC22017153MatthewM.McCormickKitware, Inc.0000-0001-9475-3756MarkL.PalmeriDuke University0000-0001-8995-0050Jean-ChristopheFillion-RobinKitware, Inc.StephenAylwardKitware, Inc.10.21105/joss.00153https://doi.org/10.5281/zenodo.290628C++https://joss.theoj.org/papers/10.21105/joss.00153.pdfultrasound, medical imaging, 3D Slicer, ITKtag:joss.theoj.org,2005:Paper/42016-05-16T00:00:00Z2021-02-15T11:34:35Zmst_clustering: Clustering via Euclidean Minimum Spanning Treesacceptedv1.0.02016-05-04 23:04:12 UTC12016-05-16 00:00:00 UTC1201612JakeVanderPlasUniversity of Washington eScience Institute0000-0002-9623-340110.21105/joss.00012https://doi.org/10.5281/zenodo.50995Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.00012.pdfmachine learning, clustering