tag:joss.theoj.org,2005:/papers/tagged/randomization?page=1Journal of Open Source Software2023-12-18T18:08:54ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45742023-12-18T18:08:54Z2023-12-19T00:00:30Zparafields: A generator for distributed, stationary Gaussian processesacceptedv0.3.02023-07-03 12:18:52 UTC922023-12-18 18:08:54 UTC820235735DominicKempfScientific Software Center, Heidelberg University, Heidelberg, Germany, Interdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany0000-0002-6140-2332OleKleinIndependent Researcher, Heidelberg, Germany0000-0002-3295-7347RobertKutriInterdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany, Institute for Mathematics, Heidelberg University, Heidelberg, Germany0009-0004-8123-4673RobertScheichlInterdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany, Institute for Mathematics, Heidelberg University, Heidelberg, Germany0000-0001-8493-4393PeterBastianInterdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany10.21105/joss.05735https://doi.org/10.5281/zenodo.10355636Python, C++, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.05735.pdfMPI, scientific computing, high performance computing, uncertainty quantification, random field generation, circulant embeddingtag:joss.theoj.org,2005:Paper/45082023-09-02T03:36:57Z2023-09-03T00:01:27ZGaussianRandomFields.jl: A Julia package to generate and sample from Gaussian random fieldsacceptedv2.2.22023-05-27 17:06:59 UTC892023-09-02 03:36:57 UTC820235595PieterjanRobbeKU Leuven, Belgium0000-0002-6254-824510.21105/joss.05595https://doi.org/10.5281/zenodo.8306255Juliahttps://joss.theoj.org/papers/10.21105/joss.05595.pdfrandom fields, uncertainty quantification, statisticstag:joss.theoj.org,2005:Paper/37622023-03-01T15:08:36Z2023-03-04T00:04:00ZThe ppmData R-package for setting up spatial point process modelsacceptedv1.0.02022-08-03 11:09:45 UTC832023-03-01 15:08:36 UTC820234771SkiptonN.c.WoolleyEnvironment, CSIRO, School of Ecosystems and Forestry Science, The University of Melbourne0000-0001-7022-0509ScottD.FosterData61, CSIRO0000-0002-6719-800210.21105/joss.04771https://doi.org/10.5281/zenodo.7679406R, C++https://joss.theoj.org/papers/10.21105/joss.04771.pdfPoint Process, Quasi-random Sampling, Dirichlet Tesselation, Inhomogeneous Poisson Point Process, R packagetag:joss.theoj.org,2005:Paper/30732022-11-11T11:25:25Z2022-11-14T13:35:42ZFrites: A Python package for functional connectivity analysis and group-level statistics of neurophysiological dataacceptedv0.4.02021-09-21 12:11:23 UTC792022-11-11 11:25:25 UTC720223842EtienneCombrissonInstitut de Neurosciences de la Timone, Aix Marseille Université, UMR 7289 CNRS, 13005, Marseille, France0000-0002-7362-3247RuggeroBasanisiInstitut de Neurosciences de la Timone, Aix Marseille Université, UMR 7289 CNRS, 13005, Marseille, France0000-0003-4776-596XViniciusLimaCordeiroInstitut de Neurosciences de la Timone, Aix Marseille Université, UMR 7289 CNRS, 13005, Marseille, France, Institut de Neurosciences des Systèmes, Aix-Marseille Université, UMR 1106 Inserm, 13005, Marseille, France0000-0001-7115-9041RobinA.aInceInstitute of Neuroscience and Psychology, University of Glasgow, Glasgow, UK0000-0001-8427-0507AndreaBrovelliInstitut de Neurosciences de la Timone, Aix Marseille Université, UMR 7289 CNRS, 13005, Marseille, France0000-0002-5342-133010.21105/joss.03842https://doi.org/10.5281/zenodo.7278278Pythonhttps://joss.theoj.org/papers/10.21105/joss.03842.pdfpython, cognitive neuroscience, computational neuroscience, neuroinformatics, neurophysiology, information theory, information-based measures, statistics, functional connectivity, fixed-effect ffx, random-effect rfx, cluster-based statistics, MEG EEG sEEG LFPs, Granger causalitytag:joss.theoj.org,2005:Paper/38032022-09-28T10:38:23Z2022-09-29T00:00:52Zaorsf: An R package for supervised learning using the oblique random survival forestaccepted0.0.12022-08-06 17:43:51 UTC772022-09-28 10:38:23 UTC720224705ByronC.JaegerWake Forest University School of Medicine0000-0001-7399-2299SawyerWeldenWake Forest University School of MedicineKristinLenoirWake Forest University School of MedicineNicholasM.PajewskiWake Forest University School of Medicine10.21105/joss.04705https://doi.org/10.5281/zenodo.7116855R, C++https://joss.theoj.org/papers/10.21105/joss.04705.pdfmachine learning, supervised learning, survival, random foresttag:joss.theoj.org,2005:Paper/37602022-08-27T06:41:11Z2022-08-28T00:00:51Zρμ: A Java library of randomization enhancements and other math utilitiesacceptedv2.3.22022-08-02 21:16:08 UTC762022-08-27 06:41:11 UTC720224663VincentA.CicirelloComputer Science, School of Business, Stockton University, Galloway, NJ 08205, USA0000-0003-1072-855910.21105/joss.04663https://doi.org/10.5281/zenodo.7026452Javahttps://joss.theoj.org/papers/10.21105/joss.04663.pdfrandomization, pseudorandom numbers, sampling algorithms, math utilities, random number distributions, random streamstag:joss.theoj.org,2005:Paper/33312022-06-02T20:13:27Z2022-06-03T00:00:41ZPropPy -- Correlated random walk propagation of cosmic rays in magnetic turbulenceacceptedv1.0.02022-02-09 17:33:02 UTC742022-06-02 20:13:27 UTC720224243P.ReichherzerRuhr-Universität Bochum, D-44801 Bochum, Germany, Ruhr Astroparticle and Plasma Physics Center, D-44780 Bochum, Germany, Université Paris-Saclay, F-91190 Gif-sur-Yvette, France0000-0003-4513-8241J.BeckerTjusRuhr-Universität Bochum, D-44801 Bochum, Germany, Ruhr Astroparticle and Plasma Physics Center, D-44780 Bochum, Germany0000-0002-1748-736710.21105/joss.04243https://doi.org/10.5281/zenodo.6573056https://joss.theoj.org/papers/10.21105/joss.04243.pdfPython, astronomy, cosmic rays, transients, AGN, transporttag:joss.theoj.org,2005:Paper/30082022-03-15T11:02:17Z2022-03-15T11:02:21ZRandomForestsGLS: An R package for Random Forests for dependent dataacceptedv0.1.22021-09-02 14:50:53 UTC712022-03-15 11:02:17 UTC720223780ArkajyotiSahaDepartments of Statistics, University of WashingtonSumantaBasuDepartment of Statistics and Data Science, Cornell UniversityAbhirupDattaDepartment of Biostatistics, Johns Hopkins Bloomberg School of Public Health10.21105/joss.03780https://doi.org/10.5281/zenodo.6257157R, C++, Chttps://joss.theoj.org/papers/10.21105/joss.03780.pdfspatial statistics, Gaussian Processes, Random forests, generalized least-squarestag:joss.theoj.org,2005:Paper/31122022-01-29T00:57:26Z2022-01-30T00:01:13ZRasusa: Randomly subsample sequencing reads to a specified coverageaccepted0.6.02021-10-18 02:52:22 UTC692022-01-29 00:57:26 UTC720223941MichaelB.HallEuropean Molecular Biology Laboratory, European Bioinformatics Institute EMBL-EBI, Hinxton, UK0000-0003-3683-620810.21105/joss.03941https://doi.org/10.5281/zenodo.5895111Rusthttps://joss.theoj.org/papers/10.21105/joss.03941.pdfbioinformatics, genomics, fastq, fasta, subsampling, randomtag:joss.theoj.org,2005:Paper/30962021-12-06T17:40:11Z2021-12-13T17:19:25Zshar: An R package to analyze species-habitat associations using point pattern analysisacceptedv1.2.22021-10-01 20:40:43 UTC682021-12-06 17:40:11 UTC620213811MaximilianH. k.HesselbarthDepartment of Ecosystem Modelling, University of Goettingen, Buesgenweg 4, 37077, Goettingen, Department of Ecology and Evolutionary Biology, University of Michigan, 1105 N University Ave, Ann Arbor, Michigan 48109, USA0000-0003-1125-991810.21105/joss.03811https://doi.org/10.5281/zenodo.5761583Rhttps://joss.theoj.org/papers/10.21105/joss.03811.pdfopen source software, spatial point pattern analysis, gamma-test, pattern reconstruction, torus-translation test, randomized-habitats procedure;