tag:joss.theoj.org,2005:/papers/tagged/qualitativeJournal of Open Source Software2024-03-28T11:28:09ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45762024-03-28T11:28:09Z2024-03-29T00:01:23ZsimChef: High-quality data science simulations in Racceptedv0.0.32023-07-03 18:14:27 UTC952024-03-28 11:28:09 UTC920246156JamesDuncanGraduate Group in Biostatistics, University of California, Berkeley, United States of America0000-0003-3297-681XTiffanyTangDepartment of Statistics, University of California, Berkeley, United States of America0000-0002-8079-6867CorrineF.ElliottDepartment of Statistics, University of California, Berkeley, United States of America0000-0001-7935-9945PhilippeBoileauGraduate Group in Biostatistics, University of California, Berkeley, United States of America0000-0002-4850-2507BinYuGraduate Group in Biostatistics, University of California, Berkeley, United States of America, Department of Statistics, University of California, Berkeley, United States of America, Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, United States of America, Center for Computational Biology, University of California, Berkeley, United States of America0000-0002-8888-406010.21105/joss.06156https://doi.org/10.5281/zenodo.10845638R, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.06156.pdfsimulations, data sciencetag:joss.theoj.org,2005:Paper/47092024-01-11T21:50:53Z2024-01-12T00:01:08ZOpen-Source Pattern Creation Tool for Medical Extended Reality Image Quality Assessmentacceptedv1.02023-08-18 18:32:57 UTC932024-01-11 21:50:53 UTC920246021BrendanCollinsDivision of Imaging, Diagnostics and Software Reliability, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, U. S. Food and Drug Administration, Silver Spring, MD, United States, Department of Computer Science, University of Maryland, College Park, MD, United States0000-0002-1529-5900RyanBeamsDivision of Imaging, Diagnostics and Software Reliability, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, U. S. Food and Drug Administration, Silver Spring, MD, United States0000-0003-2592-6064MiguelLagoDivision of Imaging, Diagnostics and Software Reliability, Office of Science and Engineering Laboratories, Center for Devices and Radiological Health, U. S. Food and Drug Administration, Silver Spring, MD, United States0000-0002-7829-957010.21105/joss.06021https://doi.org/10.5281/zenodo.10463335JavaScript, Less, SCSShttps://joss.theoj.org/papers/10.21105/joss.06021.pdfJavascript, HTML, CSS, WebXR, A-Frame, Virtual Reality, VR, Image Quality, Pattern Creationtag:joss.theoj.org,2005:Paper/45602023-12-04T17:06:09Z2023-12-05T00:00:57ZEPyT: An EPANET-Python Toolkit for Smart Water Network Simulationsacceptedv1.0.62023-06-24 07:51:13 UTC922023-12-04 17:06:09 UTC820235947MariosS.KyriakouKIOS Research and Innovation Center of Excellence, University of Cyprus, Cyprus0000-0002-2324-8661MariosDemetriadesKIOS Research and Innovation Center of Excellence, University of Cyprus, Cyprus0000-0001-7775-4319SteliosG.VrachimisKIOS Research and Innovation Center of Excellence, University of Cyprus, Cyprus, Department of Electrical and Computer Engineering, University of Cyprus, Cyprus0000-0001-8862-5205DemetriosG.EliadesKIOS Research and Innovation Center of Excellence, University of Cyprus, Cyprus0000-0001-6184-6366MariosM.PolycarpouKIOS Research and Innovation Center of Excellence, University of Cyprus, Cyprus, Department of Electrical and Computer Engineering, University of Cyprus, Cyprus0000-0001-6495-917110.21105/joss.05947https://doi.org/10.5281/zenodo.10223298Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.05947.pdfEPANET, smart water networks, hydraulics, water quality, simulationtag:joss.theoj.org,2005:Paper/48602023-12-03T12:00:12Z2023-12-04T09:25:03ZPylinac: Image analysis for routine quality assurance in radiotherapyaccepted3.162023-10-23 04:36:51 UTC922023-12-03 12:00:12 UTC820236001JamesR.KernsRadformation, New York, NY, United States of America0000-0002-2019-762710.21105/joss.06001https://doi.org/10.5281/zenodo.10145069Pythonhttps://joss.theoj.org/papers/10.21105/joss.06001.pdfmedical physics, image analysistag:joss.theoj.org,2005:Paper/42822023-10-23T10:25:02Z2023-10-24T00:01:06ZQuaC: A Pipeline Implementing Quality Control Best Practices for Genome Sequencing and Exome Sequencing Dataaccepted1.32023-03-06 22:06:16 UTC902023-10-23 10:25:02 UTC820235313ManavalanGajapathyCenter for Computational Genomics and Data Science, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America, Department of Genetics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America0000-0002-8606-0113BrandonM.WilkCenter for Computational Genomics and Data Science, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America, Department of Genetics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America0000-0002-4110-2324ElizabethA.WortheyCenter for Computational Genomics and Data Science, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America, Department of Genetics, Heersink School of Medicine, The University of Alabama at Birmingham, Birmingham, Alabama, United States of America0000-0003-4083-776410.21105/joss.05313https://doi.org/10.5281/zenodo.10002036Jinja, Pythonhttps://joss.theoj.org/papers/10.21105/joss.05313.pdfsnakemake, quality control, genome sequencing, exome sequencing, QC review, multiqc, singularity, bam, vcftag:joss.theoj.org,2005:Paper/44842023-09-08T13:39:26Z2023-09-11T07:20:25ZCRSocket: A web app component facilitating the administration of digital trials from a separate deviceaccepted1.13 (CommTest)2023-05-15 11:07:46 UTC892023-09-08 13:39:26 UTC820235658HenrikDvergsdalNord University, Norway0000-0002-8515-167010.21105/joss.05658https://doi.org/10.6084/m9.figshare.24009225.v3PHP, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05658.pdfexperimental task, developmental psychology, digital trials, measurement quality, web application, communication technologytag:joss.theoj.org,2005:Paper/43152023-07-19T16:44:11Z2023-07-21T12:42:35ZNetgraph: Publication-quality Network Visualisations in Pythonaccepted4.12.42023-03-16 15:43:55 UTC872023-07-19 16:44:11 UTC820235372PaulJ. n.BrodersenDepartment of Pharmacology, University of Oxford, United Kingdom0000-0001-5216-786310.21105/joss.05372https://doi.org/10.5281/zenodo.8138403Pythonhttps://joss.theoj.org/papers/10.21105/joss.05372.pdfgraph, network, visualisation, visualization, matplotlib, networkx, igraph, graph-tooltag:joss.theoj.org,2005:Paper/41752023-05-08T13:22:38Z2023-05-17T09:12:44ZLaMa: a thematic labelling web applicationacceptedv1.0.02023-01-23 10:24:35 UTC852023-05-08 13:22:38 UTC820235135VictoriaBogachenkovaSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsEduardoCostaMartinsSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsJarlJansenSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsAna-MariaOlteniceanuSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsBartjanHenkemansSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsChinnoLavinSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsLinhNguyenMcGill University, Montreal, CanadaTheaBradleySoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsVeerleFürstSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The NetherlandsHossainMuhammadMuctadirSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The Netherlands0000-0002-2090-4766Markvan den BrandSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The Netherlands0000-0003-3529-6182LoekCleophasSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The Netherlands0000-0002-7221-3676AlexanderSerebrenikSoftware Engineering and Technology cluster, Eindhoven University of Technology, Eindhoven, The Netherlands0000-0002-1418-009510.21105/joss.05135https://doi.org/10.5281/zenodo.7866236Python, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05135.pdfLabelling, Qualitative data analysis, Thematic analysistag:joss.theoj.org,2005:Paper/39892023-03-07T15:20:01Z2023-03-08T00:04:17ZWater Systems Integrated Modelling framework, WSIMOD: A Python package for integrated modelling of water quality and quantity across the water cycleaccepted0.2_joss_submission2022-11-07 18:03:22 UTC832023-03-07 15:20:01 UTC820234996BarnabyDobsonDepartment of Civil and Environmental Engineering, Imperial College London, UK0000-0002-0149-4124LeyangLiuDepartment of Civil and Environmental Engineering, Imperial College London, UK0000-0001-7556-1134AnaMijicDepartment of Civil and Environmental Engineering, Imperial College London, UK0000-0001-7096-940510.21105/joss.04996https://doi.org/10.5281/zenodo.7662569Pythonhttps://joss.theoj.org/papers/10.21105/joss.04996.pdfwater quality, hydrology, integrated modelling, pollutiontag:joss.theoj.org,2005:Paper/40832022-12-26T13:59:43Z2022-12-27T00:00:49Zdaiquiri: Data Quality Reporting for Temporal Datasetsacceptedv1.0.32022-12-13 14:33:14 UTC802022-12-26 13:59:43 UTC720225034T.PhuongQuanUniversity of Oxford, UK0000-0001-8566-181710.21105/joss.05034https://doi.org/10.5281/zenodo.7405432Rhttps://joss.theoj.org/papers/10.21105/joss.05034.pdfdata quality, time series, reproducible research, initial data analysis