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The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing
R
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PypeIt: The Python Spectroscopic Data Reduction Pipeline
Python Jupyter Notebook C
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dantro: a Python package for handling, transforming, and visualizing hierarchically structured data
Python
published Published over 1 year ago
A reproducible Snakemake pipeline to analyse Illumina paired-end data from ChiP-Seq experiments
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published Published over 2 years ago
SeqTools: A python package for easy transformation, combination and evaluation of large datasets.
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RNAsik: A Pipeline for complete and reproducible RNA-seq analysis that runs anywhere with speed and ease
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aesop: ARC Echelle Spectroscopic Observation Pipeline
Python Common Lisp eC Jupyter Notebook
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