tag:joss.theoj.org,2005:/papers/tagged/meta-analysisJournal of Open Source Software2024-02-27T21:44:24ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/49682024-02-27T21:44:24Z2024-02-28T00:01:10ZKoverage: Read-coverage analysis for massive (meta)genomics datasetsaccepted0.1.72023-11-30 06:28:29 UTC942024-02-27 21:44:24 UTC920246235MichaelJ.RoachFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia, Adelaide Centre for Epigenetics and the South Australian Immunogenomics Cancer Institute, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, Australia0000-0003-1488-5148BradleyJ.HartHealth and Biomedical Innovation, Clinical and Health Sciences, University of South Australia, SA, Australia0000-0001-8110-2460SarahJ.BeecroftPawsey Supercomputing Research Centre, Kensington, WA, Australia0000-0002-3935-2279BhavyaPapudeshiFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia0000-0001-5359-3100LauraK.InglisFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia0000-0001-7919-8563SusannaR.GrigsonFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia0000-0003-4738-3451VijiniMallawaarachchiFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia0000-0002-2651-8719GeorgeBourasAdelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, Australia, The Department of Surgery – Otolaryngology Head and Neck Surgery, Central Adelaide Local Health Network, Adelaide, SA, Australia0000-0002-5885-4186RobertA.EdwardsFlinders Accelerator for Microbiome Exploration, Flinders University, Adelaide, SA, Australia0000-0001-8383-894910.21105/joss.06235https://doi.org/10.5281/zenodo.10633263Pythonhttps://joss.theoj.org/papers/10.21105/joss.06235.pdfSnakemake, Genomics, Metagenomicstag:joss.theoj.org,2005:Paper/11662019-09-26T18:10:24Z2021-02-15T11:31:46ZLISC: A Python Package for Scientific Literature Collection and Analysisacceptedv0.1.02019-08-16 20:43:07 UTC412019-09-26 18:10:24 UTC420191674ThomasDonoghueDepartment of Cognitive Science, University of California, San Diego0000-0001-5911-047210.21105/joss.01674https://doi.org/10.5281/zenodo.3462035Pythonhttps://joss.theoj.org/papers/10.21105/joss.01674.pdfpython, literature analysis, text mining, web scraping, meta science, knowledge discovery, hypothesis generation, automated meta analysis, literature based discoverytag:joss.theoj.org,2005:Paper/4872018-05-03T17:52:44Z2021-02-15T11:33:24ZSuppdata: Downloading Supplementary Data from Published Manuscriptsacceptedv1.0-02018-05-01 18:53:16 UTC252018-05-03 17:52:44 UTC32018721WilliamD.PearseDepartment of Biology & Ecology Center, Utah State University, Logan, Utah, USA0000-0002-6241-3164ScottA.ChamberlainrOpenSci0000-0003-1444-913510.21105/joss.00721https://doi.org/10.5281/zenodo.1238947Rhttps://joss.theoj.org/papers/10.21105/joss.00721.pdfsupplementary materials, supplemental information, open data, meta-analysis, DOI