tag:joss.theoj.org,2005:/papers/tagged/individualsJournal of Open Source Software2022-05-04T20:20:41ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/33772022-05-04T20:20:41Z2022-05-05T00:00:45ZPlanktonIndividuals.jl: A GPU supported individual-based phytoplankton life cycle modelacceptedv0.4.92022-02-16 16:09:12 UTC732022-05-04 20:20:41 UTC720224207ZhenWuDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology0000-0001-8474-4274GaelForgetDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology0000-0002-4234-056X10.21105/joss.04207https://doi.org/10.5281/zenodo.6507001Juliahttps://joss.theoj.org/papers/10.21105/joss.04207.pdfIndividual-based model, Lagrangian particles, phytoplankton, biogeochemistry, GPU supporttag:joss.theoj.org,2005:Paper/31632022-02-05T08:41:42Z2022-02-06T00:00:29ZCacatoo: building, exploring, and sharing spatially structured models of biological systemsacceptedv1.0.02021-11-09 14:35:39 UTC702022-02-05 08:41:42 UTC720223948Bramvan DijkMax Planck Institute for Evolutionary Biology0000-0002-6330-693410.21105/joss.03948https://doi.org/10.5281/zenodo.5918404JavaScripthttps://joss.theoj.org/papers/10.21105/joss.03948.pdfjavascript, spatial structure, dynamics, individual-based models, microbial ecology and evolutiontag:joss.theoj.org,2005:Paper/27662021-10-07T16:04:09Z2022-01-18T12:08:50Zindividual: An R package for individual-based epidemiological modelsacceptedv0.1.12021-06-16 08:16:52 UTC662021-10-07 16:04:09 UTC620213539GiovanniD.CharlesMRC Centre for Global Infectious Disease Analysis, Abdul Latif Jameel Institute for Disease and Emergency Analytics (J-IDEA), Imperial College London, London, UK.SeanL.WuDivision of Epidemiology and Biostatistics, School of Public Health, University of California, Berkeley, CA 94720, USA0000-0002-5781-949310.21105/joss.03539https://doi.org/10.5281/zenodo.5529932R, C++, Chttps://joss.theoj.org/papers/10.21105/joss.03539.pdfepidemiology, individual based, agent based, infectious disease, simulation, stochastictag:joss.theoj.org,2005:Paper/20502021-04-26T17:51:13Z2022-01-18T11:54:00ZIndividualDisplacements.jl: a Julia package to simulate and study particle displacements within the climate systemacceptedv0.2.02020-10-01 03:26:47 UTC602021-04-26 17:51:13 UTC620212813GaelForgetMIT, EAPS10.21105/joss.02813https://doi.org/10.5281/zenodo.4678742Juliahttps://joss.theoj.org/papers/10.21105/joss.02813.pdfMITgcm, ocean, atmosphere, Lagrangian, particles, parcels, materials, substances, tracking, pathways, trajectories, transit times, transports, dynamics, individualstag:joss.theoj.org,2005:Paper/8982019-05-31T17:40:33Z2021-02-15T11:32:30Ztsfeaturex: An R Package for Automating Time Series Feature Extractionacceptedv.0.3.62019-02-21 17:49:25 UTC372019-05-31 17:40:33 UTC420191279NelsonA.RoqueT32 Postdoctoral Fellow, Pennsylvania State University, Center for Healthy Aging, University Park, PA, USA0000-0003-1184-202XNilamRamProfessor, Pennsylvania State University, Human Development & Family Studies, University Park, PA, USA0000-0003-1671-525710.21105/joss.01279https://doi.org/10.5281/zenodo.3235466Rhttps://joss.theoj.org/papers/10.21105/joss.01279.pdftime series, dynamics, variability, intra-individual variability