tag:joss.theoj.org,2005:/papers/tagged/image%20simulationsJournal of Open Source Software2023-09-17T18:20:22ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45632023-09-17T18:20:22Z2023-09-18T00:01:06ZSimulated Diffusion in Realistic Imaging Features of Tissue (Sim-DRIFT)acceptedv1.0.02023-06-25 16:14:13 UTC892023-09-17 18:20:22 UTC820235621JacobBlumWashington University in St. Louis, USA0000-0002-4156-4094KainenL.UttWashington University in St. Louis, USA0000-0002-8555-900010.21105/joss.05621https://doi.org/10.5281/zenodo.8351982Pythonhttps://joss.theoj.org/papers/10.21105/joss.05621.pdfDiffusion MRI, Diffusion Tensor Imaging, Biophysics, Monte-Carlo Simulation, CUDAtag:joss.theoj.org,2005:Paper/39812023-04-02T06:32:18Z2023-04-03T00:02:57ZCiclope: micro Computed Tomography to Finite Elementsacceptedv1.2.02022-10-26 13:55:30 UTC842023-04-02 06:32:18 UTC820234952GianlucaIoriSynchrotron-light for Experimental Science and Applications in the Middle East, Allan, Jordan0000-0001-8611-3281GianluigiCrimiIRCCS Istituto Ortopedico Rizzoli, Bologna, ItalyEnricoSchileoIRCCS Istituto Ortopedico Rizzoli, Bologna, Italy0000-0003-3515-1231FulviaTaddeiIRCCS Istituto Ortopedico Rizzoli, Bologna, Italy0000-0002-8342-7434GiuliaFraterrigoIRCCS Istituto Ortopedico Rizzoli, Bologna, ItalyMartinoPaniSchool of Mechanical and Design Engineering, University of Portsmouth, United Kingdom0000-0002-5786-446210.21105/joss.04952https://doi.org/10.5281/zenodo.7716943MATLAB, Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.04952.pdfcomputed tomography, finite elements, image processing, engineering, simulation, biomechanicstag:joss.theoj.org,2005:Paper/26192021-06-08T18:25:11Z2021-06-09T14:52:22Zlenstronomy II: A gravitational lensing software ecosystemacceptedv1.8.12021-05-03 14:43:40 UTC622021-06-08 18:25:11 UTC620213283SimonBirrerKavli Institute for Particle Astrophysics and Cosmology and Department of Physics, Stanford University, Stanford, CA 94305, USA, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA0000-0003-3195-5507AnowarJ.ShajibDepartment of Astronomy & Astrophysics, University of Chicago, Chicago, IL 60637, USA, Department of Physics and Astronomy, University of California, Los Angeles, CA 90095, USA0000-0002-5558-888XDanielGilmanDepartment of Astronomy and Astrophysics, University of Toronto, 50 St. George Street, Toronto, ON, M5S 3H4, Canada0000-0002-5116-7287AymericGalanInstitute of Physics, Laboratory of Astrophysics, Ecole Polytechnique Fédérale de Lausanne (EPFL), Switzerland0000-0003-2547-9815JelleAalbersKavli Institute for Particle Astrophysics and Cosmology and Department of Physics, Stanford University, Stanford, CA 94305, USA, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA0000-0003-0030-0030MartinMillonInstitute of Physics, Laboratory of Astrophysics, Ecole Polytechnique Fédérale de Lausanne (EPFL), Switzerland0000-0001-7051-497XRobertMorganPhysics Department, University of Wisconsin-Madison, 1150 University Avenue Madison, WI 53706, USA, Legacy Survey of Space and Time Corporation Data Science Fellowship Program, USA0000-0002-7016-5471GiuliaPaganoIndependent Researcher0000-0002-3636-0767JiWonParkKavli Institute for Particle Astrophysics and Cosmology and Department of Physics, Stanford University, Stanford, CA 94305, USA, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA0000-0002-0692-1092LucaTeodoriWeizmann Institute, 234 Herzl Street, Rehovot, 7610001 IsraelNicolasTessoreDepartment of Physics and Astronomy, University College London, Gower Street, London, WC1E 6BT, UK0000-0002-9696-7931MadisonUelandKavli Institute for Particle Astrophysics and Cosmology and Department of Physics, Stanford University, Stanford, CA 94305, USALyneVan de VyvereSTAR Institute, Université de Liège, Quartier Agora - Allée du six Août, 19c, B-4000 Liège, Belgium0000-0002-0585-4203SebastianWagner-CarenaKavli Institute for Particle Astrophysics and Cosmology and Department of Physics, Stanford University, Stanford, CA 94305, USA, SLAC National Accelerator Laboratory, Menlo Park, CA, 94025, USA0000-0001-5039-1685EwoudWempeKapteyn Astronomical Institute, University of Groningen, PO Box 800, 9700 AV Groningen, the Netherlands0000-0001-8232-4188LilanYangSchool of Physics and Technology, Wuhan University, Wuhan 430072, China0000-0002-8434-880XXuhengDingKavli IPMU (WPI), UTIAS, The University of Tokyo, Kashiwa, Chiba 277-8583, Japan0000-0001-8917-2148ThomasSchmidtDepartment of Physics and Astronomy, University of California, Los Angeles, CA 90095, USA0000-0002-2772-8160DominiqueSluseSTAR Institute, Université de Liège, Quartier Agora - Allée du six Août, 19c, B-4000 Liège, Belgium0000-0001-6116-2095MingZhangXinjiang Astronomical Observatory, Chinese Academy of Sciences, 150 Science 1-Street, Urumqi 831001, ChinaAdamAmaraInstitute of Cosmology and Gravitation, University of Portsmouth, Portsmouth PO1 3FX, UK0000-0003-3481-349110.21105/joss.03283https://doi.org/10.5281/zenodo.4913700Ruby, Pythonhttps://joss.theoj.org/papers/10.21105/joss.03283.pdfastronomy, gravitational lensing, image simulations, dynamicstag:joss.theoj.org,2005:Paper/20352020-12-14T12:19:03Z2021-02-15T11:29:56ZSIAL: A simple image analysis library for wet-lab scientistsacceptedv1.0.02020-09-17 01:04:09 UTC562020-12-14 12:19:03 UTC520202689DavidR.TyrpakDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy of the University of Southern California0000-0002-2281-6129YaocunLiDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy of the University of Southern CaliforniaSiqiLeiDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy of the University of Southern CaliforniaJ.AndrewMacKayDepartment of Pharmacology and Pharmaceutical Sciences, School of Pharmacy of the University of Southern California, Keck School of Medicine of the University of Southern California, Department of Ophthalmology, Roski Eye Institute, University of Southern California Viterbi School of Engineering, Biomedical Engineering10.21105/joss.02689https://doi.org/10.5281/zenodo.4312250Javahttps://joss.theoj.org/papers/10.21105/joss.02689.pdfImage Analysis, FIJI, ImageJ, reproducbile sciencetag:joss.theoj.org,2005:Paper/8012019-06-11T12:04:12Z2021-02-15T11:32:41ZQMRTools: a Mathematica toolbox for quantitative MRI analysis.acceptedv2.02019-01-04 10:54:19 UTC382019-06-11 12:04:12 UTC420191204MartijnFroelingDepartment of Radiology, University Medical Center Utrecht, Utrecht, The Netherlands0000-0003-3841-049710.21105/joss.01204https://doi.org/10.5281/zenodo.3239261Mathematicahttps://joss.theoj.org/papers/10.21105/joss.01204.pdfDiffusion Tensor Imaging, Dixon Imaging, Extended phase graph, Data processing, Simulationtag:joss.theoj.org,2005:Paper/9352019-05-09T16:32:26Z2021-02-15T11:32:23Zprysm: A Python optics moduleacceptedv0.15.12019-03-20 15:30:16 UTC372019-05-09 16:32:26 UTC420191352BrandonDubeRetro Refractions, LLC0000-0002-3837-605X10.21105/joss.01352https://doi.org/10.5281/zenodo.2672954Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.01352.pdfoptics, imaging, image simulation, diffraction, convolution, wavefront, interferogram