JOSS Papers: image segmentation

Published Papers

published Published 24 days ago

MotilA – A Python pipeline for the analysis of microglial fine process motility in 3D time-lapse multiphoton microscopy data

Python

@FabrizioMusacchio

10.21105/joss.09267

published Published 3 months ago

VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer

Python

@Morgane-des-Ligneris

10.21105/joss.08563

published Published 5 months ago

Segmenteverygrain: A Python module for segmentation of grains in images

Jupyter Notebook Python

10.21105/joss.07953

published Published 8 months ago

LabelProp: A semi-automatic segmentation tool for 3D medical images

Python PowerShell

10.21105/joss.06284

published Published 10 months ago

Fundus Image Toolbox: A Python package for fundus image processing

Python Jupyter Notebook

10.21105/joss.07101

published Published 10 months ago

RT-utils: A Minimal Python Library for RT-struct Manipulation

Python Jupyter Notebook

10.21105/joss.07361

published Published over 1 year ago

HoverFast: an accurate, high-throughput, clinically deployable nuclear segmentation tool for brightfield digital pathology images

Python

10.21105/joss.07022

published Published over 3 years ago

Volume Segmantics: A Python Package for Semantic Segmentation of Volumetric Data Using Pre-trained PyTorch Deep Learning Models

Python

10.21105/joss.04691

published Published over 3 years ago

The 3D Slicer RVXLiverSegmentation plug-in for interactive liver anatomy reconstruction from medical images

Python

@antoinevacavant

10.21105/joss.03920

published Published almost 5 years ago

ivadomed: A Medical Imaging Deep Learning Toolbox

Python

10.21105/joss.02868

Displaying papers 1 - 10 of 12 in total

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