tag:joss.theoj.org,2005:/papers/tagged/groundingJournal of Open Source Software2024-03-21T10:22:23ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45062024-03-21T10:22:23Z2024-03-24T17:58:38ZAutomatic Computation for Robot Design (ACRoD): A Python package for numerical calculation of Jacobian of a robot at a given configuration around a specified end-effector pointacceptedv1.1.42023-05-24 15:07:03 UTC952024-03-21 10:22:23 UTC920245927AkkarapakamSuneeshJacobIndian Institute of Technology Kanpur, Kanpur, India.0000-0002-9855-9368RituparnaDattaCapgemini Technological Services India Limited, Bengaluru, India.0000-0003-3816-243810.21105/joss.05927https://doi.org/10.5281/zenodo.10819242Pythonhttps://joss.theoj.org/papers/10.21105/joss.05927.pdfRobotics, Jacobian, Kinematicstag:joss.theoj.org,2005:Paper/39492022-12-13T23:25:17Z2022-12-14T11:08:15ZInspectorCell: Finding Ground Truth in Multiplexed Microscopy Imagesaccepted0.3.12022-10-07 18:08:15 UTC802022-12-13 23:25:17 UTC720224949AndreGosselinkInstitute of Medical Statistics and Computational Biology, Faculty of Medicine, University of Cologne, Cologne, Germany, R&D Department, Miltenyi Biotec B.V. & Co. KG, Bergisch Gladbach, Germany0000-0003-0181-456XTatsianaHoferCenter for Integrative Bioinformatics Vienna, Max Perutz Labs, University of Vienna, Medical University of Vienna, Vienna, AustriaElviraCriado-MoronatiR&D Department, Miltenyi Biotec B.V. & Co. KG, Bergisch Gladbach, GermanyArndtvon HaeselerCenter for Integrative Bioinformatics Vienna, Max Perutz Labs, University of Vienna, Medical University of Vienna, Vienna, Austria, Faculty of Computer Science, University of Vienna, Vienna, AustriaJuttaKolletR&D Department, Miltenyi Biotec B.V. & Co. KG, Bergisch Gladbach, Germany10.21105/joss.04949https://doi.org/10.5281/zenodo.7434875Pythonhttps://joss.theoj.org/papers/10.21105/joss.04949.pdfbiology, multiplex, microscopy, annotationtag:joss.theoj.org,2005:Paper/37302022-09-29T21:29:56Z2022-10-03T15:34:01Ztsp ("Teaspoon"): A library for ground temperature dataacceptedv1.0.12022-07-19 22:31:51 UTC772022-09-29 21:29:56 UTC720224704NicholasBrownCarleton University, Canada0000-0002-2719-067110.21105/joss.04704https://doi.org/10.5281/zenodo.7121289Pythonhttps://joss.theoj.org/papers/10.21105/joss.04704.pdfgeography, geocryology, permafrost, data, visualizationtag:joss.theoj.org,2005:Paper/33242022-07-08T15:43:16Z2022-07-09T00:01:12ZTrackerControl: Transparency and Choice around App TrackingacceptedVersion 20220205022022-02-05 13:26:51 UTC752022-07-08 15:43:16 UTC720224270KonradKollnigDepartment of Computer Science, University of Oxford0000-0002-7412-8731NigelShadboltDepartment of Computer Science, University of Oxford0000-0002-5085-972410.21105/joss.04270https://doi.org/10.5281/zenodo.6645297Java, C, SCSShttps://joss.theoj.org/papers/10.21105/joss.04270.pdfmobile apps, Android, tracking, dynamic analysis, network traffic, VPNtag:joss.theoj.org,2005:Paper/32812022-03-17T13:18:19Z2022-03-18T00:01:07ZSEEDPOD Ground Risk: A Python application and library for Uncrewed Aerial Systems ground risk analysis and risk-aware path findingacceptedv0.15.02022-01-13 12:43:07 UTC712022-03-17 13:18:19 UTC720224079AliakseiPilkoFaculty of Engineering and the Environment, University of Southampton0000-0003-0023-0300ZacharyTaitFaculty of Engineering and the Environment, University of Southampton0000-0002-5016-682110.21105/joss.04079https://doi.org/10.5281/zenodo.6363635Python, Inno Setup, QMLhttps://joss.theoj.org/papers/10.21105/joss.04079.pdfpython, uncrewed aerial systems, unmanned aerial systems, aviation safety, risk, ground risktag:joss.theoj.org,2005:Paper/30602021-11-12T21:11:08Z2021-11-13T00:00:35ZA flexible search system for high-accuracy identification of biological entities and moleculesaccepted0.6.02021-09-10 18:06:43 UTC672021-11-12 21:11:08 UTC620213756MaxFranzThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0003-0169-0480JeffreyV.WongThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0002-8912-5699MetinCanSiperComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-7556-093XChristianDallagoDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Systems Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Informatics, Technische Universität München, 85748 Garching, Germany0000-0003-4650-6181JohnGiorgiThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada0000-0001-9621-5046EmekDemirComputational Biology Program, Oregon Health and Science University, Portland, OR 97239, USA0000-0002-3663-7113ChrisSanderDepartment of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA, Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, 02215, USA, Broad Institute of MIT and Harvard, Boston, MA, 02142, USA0000-0001-6059-6270GaryD.BaderThe Donnelly Centre, University of Toronto, Toronto, Ontario, M5S 3E1, Canada, Department of Computer Science, University of Toronto, Ontario, M5S 2E4, Canada, Department of Molecular Genetics, University of Toronto, Ontario, M5S 1A8, Canada, The Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto, Ontario, M5G 1X5, Canada, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, M5G 2C1, Canada0000-0003-0185-886110.21105/joss.03756https://doi.org/10.5281/zenodo.4891545JavaScripthttps://joss.theoj.org/papers/10.21105/joss.03756.pdfbiological entities, small molecules, grounding, identifiers, identification, search, Dockertag:joss.theoj.org,2005:Paper/12812020-02-11T10:55:58Z2021-02-15T11:31:32ZExoTETHyS: Tools for Exoplanetary Transits around host starsacceptedv1.0.12019-10-08 22:16:28 UTC462020-02-11 10:55:58 UTC520201834GiuseppeMorelloAIM, CEA, CNRS, Université Paris-Saclay, Université Paris Diderot, Sorbonne Paris Cité, F-91191 Gif-sur-Yvette, France, INAF, Osservatorio Astronomico di Palermo, Piazza del Parlamento 1, 90134 Palermo, Italy, Dept. of Physics & Astronomy, University College London, Gower Street, WC1E 6BT London, UK0000-0002-4262-5661AntonioClaretInstituto de Astrofísica de Andalucía, CSIC, Apartado 3004, 18080 Granada, Spain, Dept. Física Teórica y del Cosmos, Universidad de Granada, Campus de Fuentenueva s/n, 10871, Granada, SpainMarineMartin-LagardeAIM, CEA, CNRS, Université Paris-Saclay, Université Paris Diderot, Sorbonne Paris Cité, F-91191 Gif-sur-Yvette, FranceChristopheCossouInstitut d'Astrophysique Spatiale, CNRS/Université Paris-Sud, Université Paris-Saclay, bâtiment 121, Université Paris-Sud, 91405, Orsay Cedex, FranceAngelosTsiaraDept. of Physics & Astronomy, University College London, Gower Street, WC1E 6BT London, UKPierre-OlivierLagageAIM, CEA, CNRS, Université Paris-Saclay, Université Paris Diderot, Sorbonne Paris Cité, F-91191 Gif-sur-Yvette, France10.21105/joss.01834https://doi.org/10.5281/zenodo.3577740Pythonhttps://joss.theoj.org/papers/10.21105/joss.01834.pdfastronomy, exoplanets, exoplanetary transits, galactic dynamics, stellar limb-darkeningtag:joss.theoj.org,2005:Paper/13332019-12-06T15:44:10Z2021-02-15T11:31:21ZDryft: A Python and MATLAB package to correct drifting ground reaction force signals during treadmill runningacceptedv1.0.02019-11-16 04:18:48 UTC442019-12-06 15:44:10 UTC420191910RyanS.AlcantaraDepartment of Integrative Physiology, University of Colorado Boulder, Boulder CO, USA0000-0002-8539-711X10.21105/joss.01910https://doi.org/10.5281/zenodo.3561026Matlab, Pythonhttps://joss.theoj.org/papers/10.21105/joss.01910.pdfbiomechanics, signal processing, detrend, GRF, walkingtag:joss.theoj.org,2005:Paper/5192019-03-18T17:34:51Z2021-02-15T11:33:18ZGMSimViz: Automated 3D Visualization of Ground Motion Simulation with Generic Mapping Tools (GMT)acceptedv1.0.02018-06-15 03:43:40 UTC352019-03-18 17:34:51 UTC42019808ViktorPolakQuakeCoRE, University of Canterbury, Christchurch, New Zealand0000-0001-5442-2960YuezhangZhuQuakeCoRE, University of Canterbury, Christchurch, New Zealand0000-0001-7761-077XSungBaeQuakeCoRE, University of Canterbury, Christchurch, New Zealand0000-0001-7670-8214JasonMothaQuakeCoRE, University of Canterbury, Christchurch, New Zealand0000-0003-0472-7939BrendonBradleyDepartment of Civil and Natural Resources Engineering, University of Canterbury, Christchurch, New Zealand0000-0002-4450-314XHobyRazafindrakotoQuakeCoRE, University of Canterbury, Christchurch, New Zealand0000-0002-7717-280X10.21105/joss.00808https://doi.org/10.5281/zenodo.2590852Pythonhttps://joss.theoj.org/papers/10.21105/joss.00808.pdfground motion simulation, 3d visualization, automated workflowtag:joss.theoj.org,2005:Paper/5392019-01-21T16:45:37Z2021-02-15T11:33:15ZCusToM: a Matlab toolbox for musculoskeletal simulationacceptedv1.02018-07-04 12:12:55 UTC332019-01-21 16:45:37 UTC42019927AntoineMullerUniv Rennes, CNRS, Inria, IRISA - UMR 6074, F-35000 Rennes, France0000-0003-2606-1429CharlesPontonnierUniv Rennes, CNRS, Inria, IRISA - UMR 6074, F-35000 Rennes, France, Centre de Recherche des Ecoles de Saint-Cyr Coëtquidan, 56380 Guer, France0000-0003-1140-3772PierrePuchaudUniv Rennes, CNRS, Inria, IRISA - UMR 6074, F-35000 Rennes, France, Centre de Recherche des Ecoles de Saint-Cyr Coëtquidan, 56380 Guer, France, Univ Rennes, M2S - EA 1274, 35170 Bruz, France0000-0002-9335-630XGeorgesDumontUniv Rennes, CNRS, Inria, IRISA - UMR 6074, F-35000 Rennes, France0000-0002-0709-092110.21105/joss.00927https://doi.org/10.5281/zenodo.2543645Matlabhttps://joss.theoj.org/papers/10.21105/joss.00927.pdfmotion analysis, subject-specific, kinematics, dynamics, muscle forces, ground reaction forces prediction