JOSS Papers: genomics

Published Papers

published Published 10 months ago

Acanthophis: a comprehensive plant hologenomics pipeline

Python

10.21105/joss.06062

published Published 11 months ago

Koverage: Read-coverage analysis for massive (meta)genomics datasets

Python

@beardymcjohnface

10.21105/joss.06235

published Published 12 months ago

cstag and cstag-cli: tools for manipulating and visualizing cs tags

Python

10.21105/joss.06066

published Published about 1 year ago

Dnaapler: A tool to reorient circular microbial genomes

Just Python

10.21105/joss.05968

published Published about 1 year ago

GGoutlieR: an R package to identify and visualize unusual geo-genetic patterns of biological samples

R

@CheWeiChang1992

10.21105/joss.05687

published Published about 1 year ago

QuaC: A Pipeline Implementing Quality Control Best Practices for Genome Sequencing and Exome Sequencing Data

Jinja Python

10.21105/joss.05313

published Published about 1 year ago

Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance

Python Nextflow

10.21105/joss.05397

published Published over 1 year ago

Rosalution: Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling

Python JavaScript

@serioushorncat

10.21105/joss.05443

published Published over 1 year ago

mutyper: assigning and summarizing mutation types for analyzing germline mutation spectra

Python

10.21105/joss.05227

published Published about 2 years ago

RedOak: a reference-free and alignment-free structure for indexing a collection of similar genomes

M4 C

10.21105/joss.04363

Displaying papers 11 - 20 of 73 in total

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