JOSS Papers: genomics

All Papers
1337
 Published Papers
1176
 Active Papers
161
published Published about 1 year ago

ReferenceSeeker: rapid determination of appropriate reference genomes

Python
@oschwengers
10.21105/joss.01994
published Published about 1 year ago

NCBImeta: efficient and comprehensive metadata retrieval from NCBI databases

Python
@ktmeaton
10.21105/joss.01990
published Published about 1 year ago

alignparse: A Python package for parsing complex features from high-throughput long-read sequencing

Python Jupyter Notebook
@jbloom
10.21105/joss.01915
published Published about 1 year ago

Mashtree: a rapid comparison of whole genome sequence files

Perl
@lskatz
10.21105/joss.01762
published Published about 1 year ago

Bedtoolsr: An R package for genomic data analysis and manipulation

R Python
@dphansti
10.21105/joss.01742
published Published over 1 year ago

The UCSCXenaTools R package: a toolkit for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq

R XQuery
@ShixiangWang
10.21105/joss.01627
published Published over 1 year ago

ORIS: An interactive software tool for prediction of replication origin in prokaryotic genomes

Java
@urmi-21
10.21105/joss.01589
published Published over 1 year ago

CGIMP: Real-time exploration and covariate projection for self-organizing map datasets

Python JavaScript
@adadiehl
10.21105/joss.01520
published Published almost 2 years ago

rGUIDANCE – alignment confidence score computation in R

R C++
@FranzKrah
10.21105/joss.01350
published Published almost 2 years ago

WGS2NCBI - Toolkit for preparing genomes for submission to NCBI

Perl Scala
@rvosa
10.21105/joss.01364
Displaying papers 11 - 20 of 38 in total

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ISSN 2475-9066