published Published 7 months ago
Binette: a fast and accurate bin refinement tool to construct high quality Metagenome Assembled Genomes.
Python
published Published over 4 years ago
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies
R
published Published over 6 years ago
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
Perl C++ Python
published Published about 7 years ago
reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome
Perl R
published Published over 7 years ago
chloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun data
R Perl
published Published almost 8 years ago
Kindel: indel-aware consensus for nucleotide sequence alignments
Python Jupyter Notebook
published Published over 8 years ago