JOSS Papers: fastq

All Papers
3553
 Published Papers
3085
 Active Papers
468
published Published 17 days ago

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions

Rust
@Rbfinch
10.21105/joss.08048
published Published about 2 months ago

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files.

Python Nextflow Groovy
@abhi18av
10.21105/joss.07608
published Published 12 months ago

NBI: A library for Nystrom Boundary Integral calculations

C
@mjcarley
10.21105/joss.05972
published Published over 1 year ago

Fasten: a toolkit for streaming operations on fastq files

Rust
@lskatz
10.21105/joss.06030
published Published over 2 years ago

adrt: approximate discrete Radon transform for Python

Python C++ PowerShell
@karlotness
10.21105/joss.05083
published Published about 3 years ago

Magphi: Sequence extraction tool from FASTA and GFF3 files using seed pairs

Python
@milnus
10.21105/joss.04369
published Published about 3 years ago

NeuralFieldEq.jl: A flexible solver to compute Neural Field Equations in several scenarios

Julia
@tiagoseq
10.21105/joss.03974
published Published over 3 years ago

Castor: A C++ library to code "à la Matlab"

C++
@matthieuaussal
10.21105/joss.03965
published Published over 3 years ago

Rasusa: Randomly subsample sequencing reads to a specified coverage

Rust
@mbhall88
10.21105/joss.03941
published Published about 4 years ago

ExaFMM: a high-performance fast multipole method library with C++ and Python interfaces

M4 C++
@tingyu66
10.21105/joss.03145
Displaying papers 1 - 10 of 18 in total

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ISSN 2475-9066