published Published 8 months ago
primerForge: a Python program for identifying primer pairs capable of distinguishing groups of genomes from each other
Python
published Published 10 months ago
MetaCast: A package for broadCASTing epidemiological and ecological models over META-populations.
Python Jupyter Notebook
published Published 10 months ago
ddtlcm: An R package for overcoming weak separation in Bayesian latent class analysis via tree-regularization
R
published Published 11 months ago
dataquieR 2: An updated R package for FAIR data quality assessments in observational studies and electronic health record data
R JavaScript
published Published over 2 years ago
localcovid19now: processing and mapping COVID-19 case data at subnational scales
R Vim Snippet
published Published over 2 years ago
tipr: An R package for sensitivity analyses for unmeasured confounders
R
published Published over 2 years ago
BTE: a Python module for pandemic-scale mutation-annotated phylogenetic trees
Python C++ Cython
published Published over 3 years ago
MetaWards: A flexible metapopulation framework for modelling disease spread
Python C
published Published over 3 years ago