JOSS Papers: dynamics

Published Papers

published Published 4 months ago

AmpTorch: A Python package for scalable fingerprint-based neural network training on multi-element systems with integrated uncertainty quantification

Python C++ C G-code GAP

10.21105/joss.05035

published Published 5 months ago

MembraneAnalysis.jl: A Julia package for analyzing molecular dynamics simulations of lipid membranes

Julia

10.21105/joss.05380

published Published 5 months ago

GORILLA: Guiding-center ORbit Integration with Local Linearization Approach

MATLAB Python

10.21105/joss.04890

published Published 6 months ago

APECSS: A software library for cavitation bubble dynamics and acoustic emissions

C

10.21105/joss.05435

published Published 6 months ago

Reference Point Calculator (RPC): A Shiny app for exploration of limit reference points for fisheries management

R Less SCSS

10.21105/joss.05418

published Published 7 months ago

msmhelper: A Python package for Markov state modeling of protein dynamics

Python

10.21105/joss.05339

published Published 7 months ago

chombo-discharge: An AMR code for gas discharge simulations in complex geometries

C++ Python Gnuplot

10.21105/joss.05335

published Published 7 months ago

VaMPy: An Automated and Objective Pipeline for Modeling Vascular Geometries

Python

10.21105/joss.05278

published Published 8 months ago

HylleraasMD: Massively parallel hybrid particle-field molecular dynamics in Python

Python Fortran

10.21105/joss.04149

published Published 8 months ago

SolvationAnalysis: A Python toolkit for understanding liquid solvation structure in classical molecular dynamics simulations

Python

10.21105/joss.05183

Displaying papers 11 - 20 of 157 in total

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