tag:joss.theoj.org,2005:/papers/tagged/differential%20equations?page=2Journal of Open Source Software2022-02-14T22:14:53ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/26892022-02-14T22:14:53Z2022-02-21T18:40:07Znnde: A Python package for solving differential equations using neural networksaccepted0.0.72021-05-22 14:20:45 UTC702022-02-14 22:14:53 UTC720223465EricWinterDepartment of Physics and Astronomy, George Mason University, Fairfax, Virginia, USA0000-0001-5226-2107R.s.WeigelDepartment of Physics and Astronomy, George Mason University, Fairfax, Virginia, USA0000-0002-9521-522810.21105/joss.03465https://doi.org/10.5281/zenodo.5879387Pythonhttps://joss.theoj.org/papers/10.21105/joss.03465.pdfneural networks, differential equationstag:joss.theoj.org,2005:Paper/28452021-10-23T14:46:00Z2021-10-24T00:02:56ZA Fast Iterative Method Python packageacceptedv1.02021-07-13 13:49:05 UTC662021-10-23 14:46:00 UTC620213641ThomasGranditsInstitute of Computer Graphics and Vision, TU Graz10.21105/joss.03641https://doi.org/10.5281/zenodo.5594452Python, Cudahttps://joss.theoj.org/papers/10.21105/joss.03641.pdfeikonal, partial differential equations, cudatag:joss.theoj.org,2005:Paper/22982021-09-06T01:28:18Z2021-09-07T00:00:22ZCoral: a parallel spectral solver for fluid dynamics and partial differential equationsacceptedv1.0.12021-01-07 23:05:47 UTC652021-09-06 01:28:18 UTC620212978BenjaminMiquelUniversité Paris-Saclay, CEA, CNRS, Service de Physique de l’Etat Condensé, 91191 Gif-sur-Yvette,France0000-0001-6283-038210.21105/joss.02978https://doi.org/10.5281/zenodo.5458888Fortran, Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02978.pdffluid dynamics, PDE, fortran, chebyshev, plane layertag:joss.theoj.org,2005:Paper/26912021-08-25T13:40:20Z2021-08-26T00:00:44ZSummationByPartsOperators.jl: A Julia library of provably stable discretization techniques with mimetic propertiesacceptedv0.5.12021-05-25 06:00:07 UTC642021-08-25 13:40:20 UTC620213454HendrikRanochaApplied Mathematics Münster, University of Münster, Germany0000-0002-3456-227710.21105/joss.03454https://doi.org/10.5281/zenodo.5226913Julia, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.03454.pdfnumerical analysis, differential equations, summation-by-parts, energy stability, finite differences, discontinuous Galerkin methods, Fourier collocation methodstag:joss.theoj.org,2005:Paper/23092021-06-23T16:17:59Z2021-07-05T23:07:17Zeigentools: A Python package for studying differential eigenvalue problems with an emphasis on robustnessacceptedv 2.21012021-01-14 22:54:39 UTC622021-06-23 16:17:59 UTC620213079JeffreyS.OishiDepartment of Physics and Astronomy, Bates College0000-0001-8531-6570KeatonJ.BurnsDepartment of Mathematics, MIT0000-0003-4761-4766S.E.ClarkSchool of Natural Sciences, Institute for Advanced Study0000-0002-7633-3376EvanH.AndersCIERA, Northwestern University0000-0002-3433-4733BenjaminP.BrownDepartment of Astrophysical and Planetary Sciences, University of Colorado, Boulder0000-0001-8935-219XGeoffreyM.VasilSchool of Mathematics and Statistics, University of Sydney0000-0002-8902-5030DanielLecoanetCIERA, Northwestern University, Department of Engineering Sciences and Applied Mathematics, Northwestern University0000-0002-7635-972810.21105/joss.03079https://doi.org/10.5281/zenodo.4968601Pythonhttps://joss.theoj.org/papers/10.21105/joss.03079.pdfeigenvalue problems, partial differential equations, fluid dynamics, magnetohydrodynamics, pseudospectratag:joss.theoj.org,2005:Paper/25642021-05-27T16:05:54Z2021-05-28T00:01:20Zyaml2sbml: Human-readable and -writable specification of ODE models and their conversion to SBMLacceptedv0.2.22021-04-09 14:32:35 UTC612021-05-27 16:05:54 UTC620213215JakobVanhoeferFaculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany0000-0002-3451-1701MartaR. a.MatosThe Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, DK-2800 Kgs. Lyngby, Denmark0000-0003-4288-1005DilanPathiranaFaculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany0000-0001-7000-2659YannikSchälteInstitute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany, Department of Mathematics, Technical University Munich, Garching, Germany0000-0003-1293-820XJanHasenauerFaculty of Mathematics and Natural Sciences, University of Bonn, Bonn, Germany, Institute of Computational Biology, Helmholtz Zentrum München, Neuherberg, Germany, Department of Mathematics, Technical University Munich, Garching, Germany0000-0002-4935-331210.21105/joss.03215https://doi.org/10.5281/zenodo.4787416Pythonhttps://joss.theoj.org/papers/10.21105/joss.03215.pdfSBML, Ordinary Differential Equation, YAMLtag:joss.theoj.org,2005:Paper/20312021-03-19T06:42:22Z2021-03-20T00:05:07ZBempp-cl: A fast Python based just-in-time compiling boundary element library.acceptedv0.2.12020-09-14 11:09:29 UTC592021-03-19 06:42:22 UTC620212879TimoBetckeDepartment of Mathematics, University College London0000-0002-3323-2110MatthewW.ScroggsDepartment of Engineering, University of Cambridge0000-0002-4658-244310.21105/joss.02879https://doi.org/10.5281/zenodo.4618621Python, Objective-C, C, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02879.pdfOpenCL, boundary element method, partial differential equations, numerical analysistag:joss.theoj.org,2005:Paper/20482021-03-02T16:47:25Z2021-03-03T00:01:38ZPyGDH: Python Grid Discretization Helperaccepted0.4.12020-09-30 01:16:36 UTC592021-03-02 16:47:25 UTC620212744KennethHigaEnergy Technologies Area, Lawrence Berkeley National Laboratory0000-0003-4866-0748VincentS.BattagliaEnergy Technologies Area, Lawrence Berkeley National Laboratory0000-0002-5596-9148VenkatSrinivasanArgonne Collaborative Center for Energy Storage Science, Argonne National Laboratory0000-0002-1248-595210.21105/joss.02744https://doi.org/10.5281/zenodo.4556303Pythonhttps://joss.theoj.org/papers/10.21105/joss.02744.pdfnonlinear, differential equations, finite volume method, solver, simulationtag:joss.theoj.org,2005:Paper/20362021-02-21T12:05:13Z2021-02-22T00:01:28ZThe Pencil Code, a modular MPI code for partial differential equations and particles: multipurpose and multiuser-maintainedacceptedv2020.08.062020-09-17 02:59:38 UTC582021-02-21 12:05:13 UTC620212807ThePencil CodeCollaborationNordita, KTH Royal Institute of Technology and Stockholm University, SwedenAxelBrandenburgNordita, KTH Royal Institute of Technology and Stockholm University, Sweden, Department of Astronomy, Stockholm University, Sweden, McWilliams Center for Cosmology & Department of Physics, Carnegie Mellon University, PA, USA0000-0002-7304-021XAndersJohansenGLOBE Institute, University of Copenhagen, Denmark0000-0002-5893-6165PhilippeA.BourdinSpace Research Institute, Graz, Austria, Institute of Physics, University of Graz, Graz, Austria0000-0002-6793-601XWolfgangDoblerBruker, Potsdam, GermanyWladimirLyraNew Mexico State University, Department of Astronomy, Las Cruces, NM, USA0000-0002-3768-7542MatthiasRheinhardtAstroinformatics, Department of Computer Science, Aalto University, FinlandSvenBingertGesellschaft für wissenschaftliche Datenverarbeitung mbH Göttingen, Germany0000-0001-9547-1582NilsErland L.HaugenSINTEF Energy Research, Trondheim, Norway, Norwegian University of Science and Technology, Norway, Nordita, KTH Royal Institute of Technology and Stockholm University, Sweden0000-0002-9184-8722AntonyMeeBank of America Merrill Lynch, London, UKFrederickGentAstroinformatics, Department of Computer Science, Aalto University, Finland, School of Mathematics, Statistics and Physics, Newcastle University, UK0000-0002-1331-2260NataliaBabkovskaiaNo current affiliationChao-ChinYangUniversity of Nevada, Las Vegas, USA0000-0003-2589-5034TobiasHeinemannNiels Bohr International Academy, Denmark0000-0002-2476-9733BorisDintransCINES, Montpellier, FranceDhrubadityaMitraNordita, KTH Royal Institute of Technology and Stockholm University, Sweden0000-0003-4861-8152SimonCandelaresiSchool of Mathematics and Statistics, University of Glasgow, UK0000-0002-7666-8504JörnWarneckeMax Planck Institute for Solar System Research, Germany0000-0002-9292-4600PetriJ.KäpyläInstitute for Astrophysics, University of Göttinge, Germany0000-0001-9619-0053AndreasSchreiberNo current affiliationPiyaliChatterjeeIndian Institute of Astrophysics, Bengaluru, India0000-0002-0181-2495MaaritJ.KäpyläAstroinformatics, Department of Computer Science, Aalto University, Finland, Max Planck Institute for Solar System Research, Germany0000-0002-9614-2200Xiang-YuLiNordita, KTH Royal Institute of Technology and Stockholm University, Sweden0000-0002-5722-0018JonasKrügerSINTEF Energy Research, Trondheim, Norway, Norwegian University of Science and Technology, Norway0000-0001-8036-0695JørgenR.AarnesNorwegian University of Science and Technology, Norway0000-0002-5899-2597GraemeR.SarsonSchool of Mathematics, Statistics and Physics, Newcastle University, UK0000-0001-6774-9372JeffreyS.OishiDepartment of Physics & Astronomy, Bates College, ME, USA0000-0001-8531-6570JenniferSchoberLaboratoire d'Astrophysique, EPFL, Sauverny, Switzerland0000-0001-7888-6671RaphaëlPlassonAvignon Université, France0000-0003-2319-1463ChristerSandinNordita, KTH Royal Institute of Technology and Stockholm University, Sweden0000-0002-6370-5505EwaKarchniwyNorwegian University of Science and Technology, Norway, Institute of Thermal Technology, Silesian University of Technology, Poland0000-0001-6709-1160LuizFelippe S.RodriguesSchool of Mathematics, Statistics and Physics, Newcastle University, UK, Radboud University, Netherlands0000-0002-3860-0525AlexanderHubbardDepartment of Astrophysics, American Museum of Natural History, NY, USAGustavoGuerreroPhysics Department, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil0000-0002-2671-8796AndrewSnodinSchool of Mathematics, Statistics and Physics, Newcastle University, UKIllaR.LosadaNordita, KTH Royal Institute of Technology and Stockholm University, Sweden0000-0002-0416-7516JohannesPekkiläAstroinformatics, Department of Computer Science, Aalto University, Finland0000-0002-1974-7150ChengengQianState Key Laboratory of Explosion Science and Technology, Beijing Institute of Technology, China0000-0002-5560-547510.21105/joss.02807https://doi.org/10.5281/zenodo.4553325Perl, Python, Fortranhttps://joss.theoj.org/papers/10.21105/joss.02807.pdfFortran90, fluid dynamics, magnetohydrodynamics, IDL, astrophysics, radiation, inertial particles, combustiontag:joss.theoj.org,2005:Paper/20622020-12-15T16:18:36Z2021-02-15T11:29:53Z(py)oscode: fast solutions of oscillatory ODEsacceptedv1.0.02020-10-07 17:09:40 UTC562020-12-15 16:18:36 UTC520202830FruzsinaJuliaAgocsAstrophysics Group, Cavendish Laboratory, J. J. Thomson Avenue, Cambridge, CB3 0HE, UK, Kavli Institute for Cosmology, Madingley Road, Cambridge, CB3 0HA, UK0000-0002-1763-588410.21105/joss.02830https://doi.org/10.5281/zenodo.4322958C++, C, Pythonhttps://joss.theoj.org/papers/10.21105/joss.02830.pdfnumerical methods, ordinary differential equations