JOSS Papers: data workflows

Published Papers

published Published over 1 year ago

Baargin: a Nextflow workflow for the automatic analysis of bacterial genomics data with a focus on Antimicrobial Resistance

Python Nextflow

10.21105/joss.05397

published Published over 1 year ago

einprot: flexible, easy-to-use, reproducible workflows for statistical analysis of quantitative proteomics data

R

10.21105/joss.05750

published Published over 2 years ago

Nanomesh: A Python workflow tool for generating meshes from image data

Python Jupyter Notebook PowerShell

10.21105/joss.04654

published Published over 3 years ago

The jagstargets R package: a reproducible workflow framework for Bayesian data analysis with JAGS

R

10.21105/joss.03877

published Published almost 4 years ago

Science Capsule - Capturing the Data Life Cycle

Groovy Python JavaScript

10.21105/joss.02484

published Published almost 4 years ago

The stantargets R package: a workflow framework for efficient reproducible Stan-powered Bayesian data analysis pipelines

R Stan

10.21105/joss.03193

published Published almost 4 years ago

SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data

Perl Python Prolog

10.21105/joss.02334

published Published over 4 years ago

kiwiPy: Robust, high-volume, messaging for big-data and computational science workflows

Python Jupyter Notebook

10.21105/joss.02351

published Published almost 5 years ago

Visions: An Open-Source Library for Semantic Data

Python

10.21105/joss.02145

published Published over 6 years ago

MaDaTS: Managing Data on Tiered Storage for Scientific Workflows

Python

10.21105/joss.00830

Displaying papers 1 - 10 of 11 in total

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