tag:joss.theoj.org,2005:/papers/tagged/data%20extractionJournal of Open Source Software2023-09-15T18:36:43ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/42172023-09-15T18:36:43Z2023-09-16T00:01:25ZGeodata-Harvester: A Python package to jumpstart geospatial data extraction and analysisacceptedv0.2.22023-02-17 02:47:25 UTC892023-09-15 18:36:43 UTC820235205SebastianHaanSydney Informatics Hub, The University of Sydney, Australia0000-0002-5994-5637JanuarHariantoSydney Informatics Hub, The University of Sydney, Australia0000-0002-4803-108XNathanielButterworthSydney Informatics Hub, The University of Sydney, Australia0000-0002-1212-8816ThomasBishopSydney Informatics Hub, The University of Sydney, Australia0000-0002-6723-732310.21105/joss.05205https://doi.org/10.5281/zenodo.8339817Jupyter Notebook, Pythonhttps://joss.theoj.org/papers/10.21105/joss.05205.pdfRemote Sensing, Environmental science, Geosciencetag:joss.theoj.org,2005:Paper/17492020-07-30T13:23:13Z2021-02-15T11:30:28Zhtmldate: A Python package to extract publication dates from web pagesacceptedv0.6.32020-06-17 15:27:02 UTC512020-07-30 13:23:13 UTC520202439AdrienBarbaresiBerlin-Brandenburg Academy of Sciences0000-0002-8079-869410.21105/joss.02439https://doi.org/10.5281/zenodo.3966235Pythonhttps://joss.theoj.org/papers/10.21105/joss.02439.pdfmetadata extraction, date parsing, web scraping, natural language processingtag:joss.theoj.org,2005:Paper/14312020-03-30T15:17:22Z2021-02-15T11:31:10Zmhealthtools: A Modular R Package for Extracting Features from Mobile and Wearable Sensor Dataaccepted0.2.02020-01-07 00:34:44 UTC472020-03-30 15:17:22 UTC520202106PhilSnyderSage Bionetworks0000-0002-6967-2185MeghasyamTummalacherlaSage Bionetworks0000-0002-0741-8683ThanneerPerumalSage Bionetworks0000-0003-1168-8982LarssonOmbergSage Bionetworks0000-0002-4719-912010.21105/joss.02106https://doi.org/10.5281/zenodo.3731707Rhttps://joss.theoj.org/papers/10.21105/joss.02106.pdfmhealth, mobile health, digital health, ehealth, accelerometer, feature extraction, gait, heart rate, tapping, tremor, parkinsonstag:joss.theoj.org,2005:Paper/9272019-11-14T17:49:35Z2021-02-15T11:32:24ZPDFIO: PDF Reader Library for native Juliaacceptedv0.1.12019-03-15 03:14:23 UTC432019-11-14 17:49:35 UTC420191453SambitKumarDashDirector, Lenatics Solutions Pvt. Ltd.0000-0003-4856-724410.21105/joss.01453https://doi.org/10.5281/zenodo.3541938Juliahttps://joss.theoj.org/papers/10.21105/joss.01453.pdfPDF, document archive, data extraction, text extraction, data mining, data managementtag:joss.theoj.org,2005:Paper/4802018-04-27T10:14:38Z2020-03-14T00:51:59ZEndoMineR for the extraction of endoscopic and associated pathology data from medical reportsacceptedv1.0.02018-04-25 12:47:19 UTC242018-04-27 10:14:38 UTC32018701SebastianS.ZekiDepartment of Gastroenterology, St Thomas' Hospital, Westminster Bridge Bridge Road, London SE1 7EH0000-0003-1673-266310.21105/joss.00701https://doi.org/10.5281/zenodo.1232059Rhttps://joss.theoj.org/papers/10.21105/joss.00701.pdfexample, tags, for the papertag:joss.theoj.org,2005:Paper/2882018-01-16T12:42:02Z2021-02-15T11:33:52ZchloroExtractor: extraction and assembly of the chloroplast genome from whole genome shotgun dataacceptedv1.0.02017-09-29 05:50:43 UTC212018-01-16 12:42:02 UTC32018464MarkusJ.AnkenbrandDepartment of Animal Ecology and Tropical Biology (Zoology III), University of Würzburg, Germany, These authors contributed equally to this work0000-0002-6620-807XSimonPfaffCenter for Computational and Theoretical Biology, University of Würzburg, These authors contributed equally to this work0000-0001-8505-9439NiklasTerhoevenCenter for Computational and Theoretical Biology, University of Würzburg, Department of Bioinformatics, University of WürzburgMusgaQureischiDepartment of Bioinformatics, University of Würzburg, Centre for Experimental Molecular Medicine, University Clinics Würzburg, Germany0000-0001-9661-8494MaikGündelDepartment of Bioinformatics, University of Würzburg0000-0002-0502-4576ClemensL.WeißResearch Group for Ancient Genomics and Evolution, Department of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, GermanyThomasHacklDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology0000-0002-0022-320XFrankFörsterCenter for Computational and Theoretical Biology, University of Würzburg, Department of Bioinformatics, University of Würzburg, Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Applied Ecology and Bioresources, Gießen, Germany0000-0003-4166-542310.21105/joss.00464https://doi.org/10.5281/zenodo.1148955R, Perlhttps://joss.theoj.org/papers/10.21105/joss.00464.pdfchloroplast, genome, assemblytag:joss.theoj.org,2005:Paper/3402017-12-15T19:02:18Z2021-02-15T11:33:44Ztidyhydat: Extract and Tidy Canadian Hydrometric Dataaccepted0.3.02017-12-14 17:13:53 UTC202017-12-15 19:02:18 UTC22017511SamJ.AlbersHydrology and Hydrometric Programs, Ministry of Environment and Climate Change Strategy, British Columbia Provincial Government0000-0002-9270-788410.21105/joss.00511https://doi.org/10.5281/zenodo.1116459Rhttps://joss.theoj.org/papers/10.21105/joss.00511.pdftidy data, hydrology, Canada