tag:joss.theoj.org,2005:/papers/tagged/convolutional%20neural%20networksJournal of Open Source Software2024-02-27T21:24:38ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/48132024-02-27T21:24:38Z2024-03-22T14:09:24ZDeepRank2: Mining 3D Protein Structures with Geometric Deep Learningacceptedv2.1.02023-09-22 15:36:51 UTC942024-02-27 21:24:38 UTC920245983GiuliaCrocioniNetherlands eScience Center, Amsterdam, The Netherlands0000-0002-0823-0121DaniL.BodorNetherlands eScience Center, Amsterdam, The Netherlands0000-0003-2109-2349CoosBaakmanThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0003-4317-1566FarzanehM.PariziThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0003-4230-7492Daniel-T.RademakerThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0003-1959-1317GayatriRamakrishnanThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0001-8203-2783SvenA.van der BurgNetherlands eScience Center, Amsterdam, The Netherlands0000-0003-1250-6968DarioF.MarzellaThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0002-0043-3055JoãoM.c.TeixeiraIndependent Researcher0000-0002-9113-0622LiC.XueThe Department of Medical BioSciences, Radboud University Medical Center, Nijmegen, The Netherlands0000-0002-2613-538X10.21105/joss.05983https://doi.org/10.5281/zenodo.10566809Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.05983.pdfPyTorch, structural biology, geometric deep learning, 3D protein structures, protein-protein interfaces, single-residue variants, graph neural networks, convolutional neural networks, DeepRanktag:joss.theoj.org,2005:Paper/17342020-08-06T15:41:38Z2021-02-15T11:30:30Zstella: Convolutional Neural Networks for Flare Identification in TESSacceptedv0.0.52020-06-12 14:53:08 UTC522020-08-06 15:41:38 UTC520202347AdinaD.FeinsteinDepartment of Astronomy and Astrophysics, University of Chicago, 5640 S. Ellis Ave, Chicago, IL 60637, USA, NSF Graduate Research Fellow0000-0002-9464-8101BenjaminT.MontetSchool of Physics, University of New South Wales, Sydney, NSW 2052, Australia0000-0001-7516-8308MeganAnsdellFlatiron Institute, Simons Foundation, 162 Fifth Ave, New York, NY 10010, USA10.21105/joss.02347https://doi.org/10.5281/zenodo.3970854Pythonhttps://joss.theoj.org/papers/10.21105/joss.02347.pdfastronomy, PMS stars, stellar activity, stellar rotationtag:joss.theoj.org,2005:Paper/1682017-07-04T00:00:00Z2021-02-15T11:34:13ZText detection in screen images with a Convolutional Neural Networkacceptedv1.12017-03-09 19:05:33 UTC152017-07-04 00:00:00 UTC22017235DominikMoritzUniversity of Washington0000-0002-3110-105310.21105/joss.00235https://doi.org/10.5281/zenodo.821196Pythonhttps://joss.theoj.org/papers/10.21105/joss.00235.pdfdeep learning, visualization, text detectiontag:joss.theoj.org,2005:Paper/2052017-06-22T00:00:00Z2021-02-15T11:34:06ZkerasR: R Interface to the Keras Deep Learning Libraryaccepted0.6.12017-06-02 15:21:59 UTC142017-06-22 00:00:00 UTC22017296TaylorB.ArnoldUniversity of Richmond, Department of Mathematics and Computer Science0000-0003-0576-066910.21105/joss.00296https://doi.org/10.5281/zenodo.814996R, PowerShellhttps://joss.theoj.org/papers/10.21105/joss.00296.pdfneural networks, convolutional neural networks, recurrent neural networks, computer vision, natural language processing