tag:joss.theoj.org,2005:/papers/tagged/coding?page=2Journal of Open Source Software2022-12-23T18:24:34ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/39072022-12-23T18:24:34Z2022-12-24T00:00:58ZGLUE Code: A framework handling communication and interfaces between scalesacceptedv1.0.02022-09-20 21:01:36 UTC802022-12-23 18:24:34 UTC720224822AleksandraPachalievaCenter for Non-Linear Studies, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA, Earth and Environmental Sciences (EES) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0003-1246-0410RobertS.PavelComputer, Computational and Statistical Sciences (CCS) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0001-7913-9918JavierE.SantosCenter for Non-Linear Studies, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA, Earth and Environmental Sciences (EES) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0002-2404-3975AbdourahmaneDiawFusion Energy Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, TN 37831, USA0000-0001-6743-3255NicholasLubbersComputer, Computational and Statistical Sciences (CCS) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0002-9001-9973MohamedMehanaEarth and Environmental Sciences (EES) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0003-2472-2879JeffreyR.HaackComputer, Computational and Statistical Sciences (CCS) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0002-2044-0885HariS.ViswanathanEarth and Environmental Sciences (EES) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0002-1178-9647DanielLivescuComputer, Computational and Statistical Sciences (CCS) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0003-2367-1547TimothyC.GermannTheoretical Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0002-6813-238XChristophJunghansComputer, Computational and Statistical Sciences (CCS) Division, Los Alamos National Laboratory, Los Alamos, 87545 NM, USA0000-0003-0925-145810.21105/joss.04822https://doi.org/10.5281/zenodo.7469110Fortran, C++, C, Pythonhttps://joss.theoj.org/papers/10.21105/joss.04822.pdfmultiscale simulations, active machine leanring, scale-bridging, ICF, MDtag:joss.theoj.org,2005:Paper/33062022-12-12T11:00:17Z2022-12-13T00:00:54ZFlexWing-ROM: A matlab framework for data-driven reduced-order modeling of flexible wingsacceptedv1.0.02022-01-27 23:12:42 UTC802022-12-12 11:00:17 UTC720224211UrbanFaselDepartment of Aeronautics, Imperial College, London, United KingdomNicolaFonziDepartment of Aerospace Science and Technology, Politecnico di Milano, Milan, ItalyAndreaIannelliDepartment of Information Technology and Electrical Engineering, ETH Zurich, Zurich, SwitzerlandStevenL.BruntonDepartment of Mechanical Engineering, University of Washington, Seattle, United States of America10.21105/joss.04211https://doi.org/10.5281/zenodo.7419465MATLAB, GLSL, C++https://joss.theoj.org/papers/10.21105/joss.04211.pdfMatlab, data-driven modeling, aeroelasticity, morphing wings, dynamic mode decomposition with controltag:joss.theoj.org,2005:Paper/38242022-10-28T15:59:09Z2022-10-29T00:00:34ZScientific Computational Imaging Code (SCICO)acceptedv0.0.22022-08-19 18:04:15 UTC782022-10-28 15:59:09 UTC720224722ThiloBalkeLos Alamos National Laboratory, Purdue University0000-0002-1716-5923FernandoDavisLos Alamos National Laboratory, University of Puerto Rico-MayaguezCristinaGarcia-CardonaLos Alamos National Laboratory0000-0002-5641-3491SoumenduMajeeSamsung Research America0000-0002-8442-2897MichaelMcCannLos Alamos National Laboratory0000-0001-7645-252XLukePfisterLos Alamos National Laboratory0000-0001-7485-5966BrendtWohlbergLos Alamos National Laboratory0000-0002-4767-184310.21105/joss.04722https://doi.org/10.5281/zenodo.7255839Pythonhttps://joss.theoj.org/papers/10.21105/joss.04722.pdfcomputational imaging, scientific imaging, inverse problemstag:joss.theoj.org,2005:Paper/31342022-08-26T09:42:35Z2022-08-27T00:01:20Zpyprop8: A lightweight code to simulate seismic observables in a layered half-spaceacceptedv1.02021-10-26 13:25:42 UTC762022-08-26 09:42:35 UTC720224217AndrewP.ValentineDepartment of Earth Sciences, Durham University.0000-0001-6134-9351MalcolmSambridgeResearch School of Earth Sciences, The Australian National University.0000-0003-2858-317510.21105/joss.04217https://doi.org/10.5281/zenodo.7019949Mathematica, Pythonhttps://joss.theoj.org/papers/10.21105/joss.04217.pdfseismology, earthquakestag:joss.theoj.org,2005:Paper/37052022-08-13T00:43:18Z2023-08-21T09:35:26ZMARTINI: The Little Match and Replace Tool for Automatic Code Rewritingaccepted0.0.02022-07-06 00:18:32 UTC762022-08-13 00:43:18 UTC720224590AlisterJohnsonUniversity of Oregon, Eugene, OR, USA0000-0002-7199-8221CamilleCotiUniversité du Québec à Montréal, Montréal, QC, CanadaAllenD.MalonyUniversity of Oregon, Eugene, OR, USAJohannesDoerfertArgonne National Laboratory, Lemont, IL, USA0000-0001-7870-896310.21105/joss.04590https://doi.org/10.6084/m9.figshare.20483967.v1C++, JavaScript, Pythonhttps://joss.theoj.org/papers/10.21105/joss.04590.pdfClang, meteprogramming, refactoring, AST matchers, Euro-Partag:joss.theoj.org,2005:Paper/24282022-04-26T11:09:34Z2022-04-27T07:09:58ZTUM Open Infra Platform: an open source package for simultaneous viewing and analysis of digital models in the civil engineering domainaccepted[still a moving target]2021-02-23 10:24:28 UTC722022-04-26 11:09:34 UTC720223061ŠtefanJaudChair for Computational Modeling and Simulation, Technical University of Munich0000-0003-0387-3440HelgeHechtChair for Computational Modeling and Simulation, Technical University of Munich0000-0001-6744-996XJonasSchlengerChair for Computational Modeling and Simulation, Technical University of Munich0000-0002-4875-5117JulianAmannChair for Computational Modeling and Simulation, Technical University of Munich10.21105/joss.03061https://doi.org/10.5281/zenodo.6488493C++, C, Smalltalkhttps://joss.theoj.org/papers/10.21105/joss.03061.pdfbuilding information modelling (BIM), industry foundation classes (IFC), point cloud data (PCD), EXPRESS parser, code generationtag:joss.theoj.org,2005:Paper/29072022-03-30T20:02:38Z2022-03-31T00:00:57ZMandyoc: A finite element code to simulate thermochemical convection in parallelacceptedv0.1.12021-07-27 18:09:36 UTC712022-03-30 20:02:38 UTC720224070VictorSacekInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0001-9598-5081JamisonAssunçãoInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0003-2822-2417AgustinaPesceInstituto Geofísico Sismológico Ing. Volponi, Universidad Nacional de San Juan, Argentina, CONICET, Argentina0000-0002-5538-8845RafaelMonteiroda SilvaInstituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo, Brazil0000-0001-8645-244310.21105/joss.04070https://doi.org/10.5281/zenodo.6390220C++, Chttps://joss.theoj.org/papers/10.21105/joss.04070.pdfPETSc, mantle convection, lithosphere geodynamics, finite elementtag:joss.theoj.org,2005:Paper/32332022-03-22T19:48:42Z2022-10-11T06:57:26ZQDistRnd: A GAP package for computing the distance of quantum error-correcting codesaccepted0.7.02021-12-01 22:20:16 UTC712022-03-22 19:48:42 UTC720224120LeonidP.PryadkoDepartment of Physics & Astronomy, University of California, Riverside, California, 92521 USA, The Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 Russia0000-0002-4990-0259VadimA.ShabashovThe Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 RussiaValeriiK.KozinDepartment of Physics, University of Basel, Klingelbergstrasse 82, CH-4056 Basel, Switzerland, The Department of Physics & Engineering, ITMO University, St. Petersburg, 197101 Russia10.21105/joss.04120https://doi.org/10.5281/zenodo.6374733GAPhttps://joss.theoj.org/papers/10.21105/joss.04120.pdfQuantum Error Correction, QECC, Quantum Error-Correcting Code, Qudit code, quantum stabilizer code, CSS codetag:joss.theoj.org,2005:Paper/31882022-03-16T19:25:29Z2022-10-11T12:05:08ZCastor: A C++ library to code "à la Matlab"acceptedv1.0.02021-11-23 10:54:40 UTC712022-03-16 19:25:29 UTC720223965MatthieuAussalEcole Polytechnique (CMAP), INRIA, Institut Polytechnique Paris, Route de Saclay 91128, Palaiseau, France0000-0002-2812-7578MarcBakryEcole Polytechnique (CMAP), INRIA, Institut Polytechnique Paris, Route de Saclay 91128, Palaiseau, FranceLaurentSeriesEcole Polytechnique (CMAP), Institut Polytechnique Paris, Route de Saclay 91128, Palaiseau, France10.21105/joss.03965https://doi.org/10.5281/zenodo.6360120C++https://joss.theoj.org/papers/10.21105/joss.03965.pdfScientific computing, Fast prototyping, FEM/BEM simulationtag:joss.theoj.org,2005:Paper/29132021-12-28T15:52:08Z2021-12-29T00:00:41ZORION2: A magnetohydrodynamics code for star formationacceptedv1.0.02021-07-30 21:07:38 UTC682021-12-28 15:52:08 UTC620213771PakShingLiUC BerkeleyAndrewJ.CunninghamLawrence Livermore National LaboratoryBrandtL.GachesUniversity of CologneRichardI.KleinUC Berkeley, Lawrence Livermore National LaboratoryMarkR.KrumholzAustralian National UniversityAaronT.LeeSaint Mary's College of California0000-0002-8428-8050ChristopherF.McKeeUC BerkeleyStellaS. r.OffnerThe University of Texas at Austin0000-0003-1252-9916AnnaL.RosenCenter for Astrophysics | Harvard & SmithsonianAaronSkinnerLawrence Livermore National Laboratory10.21105/joss.03771https://doi.org/10.5281/zenodo.5791188C++, Gnuplot, Fortranhttps://joss.theoj.org/papers/10.21105/joss.03771.pdfastronomy, star formation, molecular clouds, magnetohydrodynamics, adaptive mesh refinement