tag:joss.theoj.org,2005:/papers/tagged/cffJournal of Open Source Software2023-10-31T15:03:59ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/42052023-10-31T15:03:59Z2023-11-01T00:00:33ZPeleLMeX: an AMR Low Mach Number Reactive Flow Simulation Code without level sub-cyclingacceptedv23.022023-02-14 00:23:22 UTC902023-10-31 15:03:59 UTC820235450LucasEsclapezHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0002-2438-7292MarcDayHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0002-1711-3963JohnBellCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, USA0000-0002-5749-334XAnneFeldenCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, USA0009-0006-2724-4461CandaceGiletIndependent Researcher, USARayGroutHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0002-1760-8747MarcHenryde FrahanHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0001-7742-1565EmmanuelMotheauCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, USA0000-0003-1968-1611AndrewNonakaCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, USA0000-0003-1791-0265LandonOwenSandia National Laboratory, USABrucePerryHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0002-9150-8103JonRoodHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0002-7513-3225NicolasWimerHigh Performance Algorithms and Complex Fluids, National Renewable Energy Laboratory, USA0000-0001-5083-0799WeiqunZhangCenter for Computational Sciences and Engineering, Lawrence Berkeley National Laboratory, USA0000-0001-8092-197410.21105/joss.05450https://doi.org/10.5281/zenodo.10056232C++, Roffhttps://joss.theoj.org/papers/10.21105/joss.05450.pdfadaptive mesh refinement, hydrodynamics, combustion, reactions, ExaScale, CFD, low-Mach numbertag:joss.theoj.org,2005:Paper/44592023-08-24T14:59:41Z2023-08-25T08:40:37ZSnek5000: a new Python framework for Nek5000acceptedv0.9.02023-04-28 15:09:21 UTC882023-08-24 14:59:41 UTC820235586AshwinVishnuMohananSwedish Meteorological and Hydrological Institute, Norrköping, Sweden0000-0002-2979-6327ArmanKhoubaniLaboratoire des Écoulements Géophysiques et Industriels, Université Grenoble Alpes, CNRS, Grenoble INP, 38000 Grenoble, France0000-0002-0295-5308PierreAugierLaboratoire des Écoulements Géophysiques et Industriels, Université Grenoble Alpes, CNRS, Grenoble INP, 38000 Grenoble, France0000-0001-9481-445910.21105/joss.05586https://doi.org/10.5281/zenodo.8278552Python, Nix, Jinjahttps://joss.theoj.org/papers/10.21105/joss.05586.pdfCFD, Nek5000, FluidSim, Snakemaketag:joss.theoj.org,2005:Paper/36092023-06-28T15:48:02Z2023-06-29T00:01:31ZHallThruster.jl: a Julia package for 1D Hall thruster discharge simulationacceptedv0.1.02022-05-17 20:47:49 UTC862023-06-28 15:48:02 UTC820234672ThomasMarksPlasmadynamics and Electric Propulsion Laboratory, University of Michigan, Ann Arbor, USA0000-0003-3614-6127PaulSchedlerETH Zurich, Zurich, SwitzerlandBenjaminJornsPlasmadynamics and Electric Propulsion Laboratory, University of Michigan, Ann Arbor, USA0000-0001-9296-204410.21105/joss.04672https://doi.org/10.5281/zenodo.8066246Juliahttps://joss.theoj.org/papers/10.21105/joss.04672.pdfPlasma physics, Low temperature magnetized plasma, CFD, Hall Thruster, Electric Propulsiontag:joss.theoj.org,2005:Paper/37322023-04-05T12:33:29Z2023-04-06T00:03:30ZRTMsim - A Julia module for filling simulations in Resin Transfer Moulding with the Finite Area Methodacceptedv1.0.12022-07-20 06:49:04 UTC842023-04-05 12:33:29 UTC820234763ChristofObertscheiderAerospace Engineering Department, University of Applied Sciences Wiener Neustadt, Johannes-Gutenberg-Straße 3, 2700, Wiener Neustadt, AustriaEwaldFausterProcessing of Composites Group, Department Polymer Engineering and Science, Montanuniversität Leoben, Otto Glöckl-Straße 2, 8700 Leoben, Austria10.21105/joss.04763https://doi.org/10.5281/zenodo.7799266Juliahttps://joss.theoj.org/papers/10.21105/joss.04763.pdfComputational Fluid Dynamics (CFD), Shell mesh, Resin Transfer moulding (RTM), Liquid composite moulding (LCM), Filling simulationtag:joss.theoj.org,2005:Paper/32982022-05-04T18:45:45Z2022-05-05T00:00:47ZGEMMI: A library for structural biologyacceptedv0.5.12022-01-19 22:13:15 UTC732022-05-04 18:45:45 UTC720224200MarcinWojdyrGlobal Phasing Ltd., Cambridge, UK0000-0003-3980-409210.21105/joss.04200https://doi.org/10.6084/m9.figshare.19678776C++, Fortranhttps://joss.theoj.org/papers/10.21105/joss.04200.pdfstructural biology, crystallography, CIFtag:joss.theoj.org,2005:Paper/31602021-11-09T08:54:21Z2021-11-10T00:00:26Zcffr: Generate Citation File Format Metadata for R Packagesacceptedv0.1.02021-11-08 09:28:24 UTC672021-11-09 08:54:21 UTC620213900DiegoHernangómezIndependent Researcher0000-0001-8457-465810.21105/joss.03900https://doi.org/10.5281/zenodo.5646626https://joss.theoj.org/papers/10.21105/joss.03900.pdfR, cff, citation, credit, metadatatag:joss.theoj.org,2005:Paper/21512021-04-20T17:37:58Z2021-04-21T00:01:12ZUQit: A Python package for uncertainty quantification (UQ) in computational fluid dynamics (CFD)acceptedv1.0.22020-11-09 21:35:13 UTC602021-04-20 17:37:58 UTC620212871SalehRezaeiraveshSimEx/FLOW, Engineering Mechanics, KTH Royal Institute of Technology,, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden0000-0002-9610-9910RicardoVinuesaSimEx/FLOW, Engineering Mechanics, KTH Royal Institute of Technology,, Swedish e-Science Research Centre (SeRC), Stockholm, SwedenPhilippSchlatterSimEx/FLOW, Engineering Mechanics, KTH Royal Institute of Technology,, Swedish e-Science Research Centre (SeRC), Stockholm, Sweden10.21105/joss.02871https://doi.org/10.5281/zenodo.4704355Python, Jupyter Notebookhttps://joss.theoj.org/papers/10.21105/joss.02871.pdfuncertainty quantification (UQ), computational fluid dynamics (CFD)tag:joss.theoj.org,2005:Paper/18732021-03-04T15:36:19Z2021-03-10T11:14:55ZOff-resonance CorrecTion OPen soUrce Software (OCTOPUS)accepted0.1.42020-07-22 19:16:58 UTC592021-03-04 15:36:19 UTC620212578MarinaManso JimenoDepartment of Biomedical Engineering, Columbia University in the City of New York, USA, Columbia Magnetic Resonance Research Center, Columbia University in the City of New York, USA0000-0002-1141-2049JohnThomasVaughanDepartment of Biomedical Engineering, Columbia University in the City of New York, USA, Columbia Magnetic Resonance Research Center, Columbia University in the City of New York, USA0000-0002-6933-3757SairamGeethanathColumbia Magnetic Resonance Research Center, Columbia University in the City of New York, USA0000-0002-3776-411410.21105/joss.02578https://doi.org/10.5281/zenodo.4574444Pythonhttps://joss.theoj.org/papers/10.21105/joss.02578.pdfMRI, off-resonance correctiontag:joss.theoj.org,2005:Paper/10902020-02-10T13:09:11Z2021-02-15T11:32:00ZFEST-3D: Finite-volume Explicit STructured 3-Dimensional solveracceptedv1.02019-07-04 06:35:49 UTC462020-02-10 13:09:11 UTC520201555JatinderPal SinghSandhuDepartment of Aerospace engineering, IIT Madras, Chennai0000-0002-1546-3855AnantGirdharDepartment of Aerospace engineering, IIT Madras, ChennaiRakeshRamakrishnanDepartment of Aerospace engineering, IIT Madras, ChennaiR.D.TejaDepartment of Aerospace engineering, IIT Madras, ChennaiSantanuGhoshDepartment of Aerospace engineering, IIT Madras, Chennai10.21105/joss.01555https://doi.org/10.5281/zenodo.3660408Fortran, Chttps://joss.theoj.org/papers/10.21105/joss.01555.pdfCFD, Turbulence/Transition modeling, Structured grid, RANS modeling, Higher-order method, FORTRAN 90tag:joss.theoj.org,2005:Paper/4962018-05-26T16:10:20Z2021-02-15T11:33:22ZThe Vascular Modeling Toolkit: A Python Library for the Analysis of Tubular Structures in Medical Imagesacceptedv1.4.02018-05-15 01:35:40 UTC252018-05-26 16:10:20 UTC32018745RichardIzzoUniversity at Buffalo0000-0002-0811-6513DavidSteinmanUniversity of Toronto0000-0002-7963-1168SimoneManiniOrobix Srl.0000-0003-4350-659XLucaAntigaOrobix Srl.0000-0002-8367-227X10.21105/joss.00745https://doi.org/10.5281/zenodo.1253598Python, PowerShellhttps://joss.theoj.org/papers/10.21105/joss.00745.pdfC++, vascular modeling, image processing, medical imaging, image segmentation, computational geometry, surface extraction, CFD Meshing, hemodynamics, mesh generation, centerline