JOSS Papers: biology

All Papers
1202
 Published Papers
1032
 Active Papers
170
published Published 4 days ago

CancerSim: A Cancer Simulation Package for Python 3

Python OpenEdge ABL
@CFGrote
10.21105/joss.02436
published Published 20 days ago

Flint: a simulator for biological and physiological models in ordinary and stochastic differential equations

M4 C++ C
@tabe
10.21105/joss.02331
published Published about 1 month ago

dms-view: Interactive visualization tool for deep mutational scanning data

Ruby JavaScript Python
@skhilton
10.21105/joss.02353
published Published 3 months ago

graphsim: An R package for simulating gene expression data from graph structures of biological pathways

R Ruby
@TomKellyGenetics
10.21105/joss.02161
published Published 4 months ago

taurenmd: A command-line interface for analysis of Molecular Dynamics simulations.

Python
@joaomcteixeira
10.21105/joss.02175
published Published 6 months ago

OrNet - a Python Toolkit to Model the Diffuse Structure of Organelles as Social Networks

Python
@Marcdh3
10.21105/joss.01983
published Published 7 months ago

scPCA: A toolbox for sparse contrastive principal component analysis in R

R
@PhilBoileau
10.21105/joss.02079
published Published 10 months ago

BioSimSpace: An interoperable Python framework for biomolecular simulation

Python Jupyter Notebook
@lohedges
10.21105/joss.01831
published Published about 1 year ago

SBMLtoODEpy: A software program for converting SBML models into ODE models in Python

Jupyter Notebook JavaScript
@ashleefv
10.21105/joss.01643
published Published over 1 year ago

SCONE: Open Source Software for Predictive Simulation of Biological Motion

Roff
@tgeijten
10.21105/joss.01421
Displaying papers 1 - 10 of 23 in total

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ISSN 2475-9066