JOSS Papers: bioinformatic

All Papers
3959
 Published Papers
3422
 Active Papers
537
published Published 8 months ago

grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions

Rust
@Rbfinch
10.21105/joss.08048
published Published 8 months ago

<code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences

Python Jupyter Notebook
@GavinHuttley
10.21105/joss.07765
published Published 9 months ago

gtexr: A convenient R interface to the Genotype-Tissue Expression (GTEx) Portal API

R
@rmgpanw
10.21105/joss.08249
published Published 9 months ago

GraphBin-Tk: assembly graph-based metagenomic binning toolkit

Python
@Vini2
10.21105/joss.07713
published Published 9 months ago

target-methylseq-qc: a lightweight pipeline for collecting metrics from targeted sequence mapping files.

Python Nextflow Groovy
@abhi18av
10.21105/joss.07608
published Published 11 months ago

Af-analysis: a Python package for Alphafold analysis

Jupyter Notebook Python
@samuelmurail
10.21105/joss.07577
published Published about 1 year ago

delfies: a Python package for the detection of DNA breakpoints with neo-telomere addition

Python
@bricoletc
10.21105/joss.07385
published Published about 1 year ago

Snk: A Snakemake CLI and Workflow Management System

Python
@wytamma
10.21105/joss.07410
published Published about 1 year ago

PhyloX: A Python package for complete phylogenetic network workflows

Python
@RemieJanssen
10.21105/joss.06427
published Published about 1 year ago

APackOfTheClones: Visualization of clonal expansion with circle packing

R C++
@Qile0317
10.21105/joss.06868
Displaying papers 11 - 20 of 103 in total

Journal of Open Source Software is an affiliate of the Open Source Initiative.

Journal of Open Source Software is part of Open Journals, which is a NumFOCUS-sponsored project.

Table of Contents
Public user content licensed CC BY 4.0 unless otherwise specified.
ISSN 2475-9066