tag:joss.theoj.org,2005:/papers/tagged/biogeochemistryJournal of Open Source Software2023-10-05T14:26:22ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/45612023-10-05T14:26:22Z2023-10-13T15:41:46ZOceanBioME.jl: A flexible environment for modelling the coupled interactions between ocean biogeochemistry and physicsacceptedv0.2.02023-06-24 11:34:39 UTC902023-10-05 14:26:22 UTC820235669JagoStrong-WrightDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge, United Kingdom, Centre for Climate Repair, Cambridge, United Kingdom0000-0002-7174-5283SiChenDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge, United Kingdom, Centre for Climate Repair, Cambridge, United Kingdom0009-0002-1296-7166NavidC.ConstantinouAustralian National University, Australia, Australian Research Council Centre for Climate Extremes0000-0002-8149-4094SimoneSilvestriMassachusetts Institute of Technology, USA0000-0002-7156-946XGregoryLeClaireWagnerMassachusetts Institute of Technology, USA0000-0001-5317-2445JohnR.TaylorDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge, United Kingdom, Centre for Climate Repair, Cambridge, United Kingdom0000-0002-1292-375610.21105/joss.05669https://doi.org/10.5281/zenodo.8403490Juliahttps://joss.theoj.org/papers/10.21105/joss.05669.pdfjulia, biogeochemistry, climate, ocean, carbontag:joss.theoj.org,2005:Paper/33772022-05-04T20:20:41Z2022-05-05T00:00:45ZPlanktonIndividuals.jl: A GPU supported individual-based phytoplankton life cycle modelacceptedv0.4.92022-02-16 16:09:12 UTC732022-05-04 20:20:41 UTC720224207ZhenWuDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology0000-0001-8474-4274GaelForgetDepartment of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology0000-0002-4234-056X10.21105/joss.04207https://doi.org/10.5281/zenodo.6507001Juliahttps://joss.theoj.org/papers/10.21105/joss.04207.pdfIndividual-based model, Lagrangian particles, phytoplankton, biogeochemistry, GPU supporttag:joss.theoj.org,2005:Paper/4552018-05-04T10:25:27Z2021-02-15T11:33:30ZMicroBenthos: a modeling framework for microbial benthic ecologyacceptedv0.8.22018-04-04 16:53:07 UTC252018-05-04 10:25:27 UTC32018674ArjunChennuMax Planck Institute for Marine Microbiology0000-0002-0389-558910.21105/joss.00674https://doi.org/10.5281/zenodo.1240940Pythonhttps://joss.theoj.org/papers/10.21105/joss.00674.pdfmarine biology, biogeochemistry, microbial ecology, microbial mats, sediments, modeling, simulation, microbenthic habitat