tag:joss.theoj.org,2005:/papers/tagged/biodiversityJournal of Open Source Software2024-01-12T08:36:31ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/50002024-01-12T08:36:31Z2024-01-13T00:00:51Zdwctaxon, an R package for editing and validating taxonomic data in Darwin Core formatacceptedv2.0.32023-12-15 08:13:29 UTC932024-01-12 08:36:31 UTC920246215JoelH.NittaGraduate School of Global and Transdisciplinary Studies, Chiba University, Japan0000-0003-4719-7472WataruIwasakiDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan, Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan, Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, Japan0000-0002-9169-924510.21105/joss.06215https://doi.org/10.5281/zenodo.6388271Rhttps://joss.theoj.org/papers/10.21105/joss.06215.pdftaxonomy, biodiversitytag:joss.theoj.org,2005:Paper/45202023-06-28T15:40:42Z2023-06-29T10:01:10ZPyafscgap.org: Open source multi-modal Python-based tools for NOAA AFSC RACE GAPacceptedv 1.0.02023-06-01 20:25:41 UTC862023-06-28 15:40:42 UTC820235593ASamuelPottingerUniversity of California, Berkeley, California, United States of America0000-0002-0458-4985GiuliaZarpellonUniversity of California, Berkeley, California, United States of America0000-0002-9122-470910.21105/joss.05593https://doi.org/10.5281/zenodo.8091843Python, JavaScripthttps://joss.theoj.org/papers/10.21105/joss.05593.pdffishery, alaska, groundfish, biodiversity, food, visualizationtag:joss.theoj.org,2005:Paper/28162021-08-20T20:59:21Z2021-08-21T00:00:36ZThe MarINvaders Toolkitacceptedv0.3.12021-06-23 12:41:05 UTC642021-08-20 20:59:21 UTC620213575RadekLonkaIndustrial Ecology Programme, NTNU Trondheim, Norway.0000-0002-5815-8682FrancescaVeronesIndustrial Ecology Programme, NTNU Trondheim, Norway.0000-0002-2908-328XKonstantinStadlerIndustrial Ecology Programme, NTNU Trondheim, Norway.0000-0002-1548-201X10.21105/joss.03575https://doi.org/10.5281/zenodo.4621392Python, Roffhttps://joss.theoj.org/papers/10.21105/joss.03575.pdfinvasive species, marine biodiversity, ecosystems, alienstag:joss.theoj.org,2005:Paper/22292021-03-02T13:31:40Z2021-03-03T00:01:32Zforestatrisk: a Python package for modelling and forecasting deforestation in the tropicsacceptedv0.22020-12-10 10:14:08 UTC592021-03-02 13:31:40 UTC620212975GhislainVieilledentCIRAD, UMR AMAP, F--34398 Montpellier, France, CIRAD, Forêts et Sociétés, F--34398 Montpellier, France., AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France., European Commission, Joint Research Centre (JRC), I--21027 Ispra (VA), Italy.0000-0002-1685-499710.21105/joss.02975https://doi.org/10.5281/zenodo.4570632C, C++https://joss.theoj.org/papers/10.21105/joss.02975.pdfPython, land use change, spatial modelling, spatial analysis, forecasting, spatial autocorrelation, tropical forests, roads, protected areas, biodiversity scenario, ipbes, co2 emissions, ipcctag:joss.theoj.org,2005:Paper/22172020-12-21T23:35:31Z2021-02-15T11:29:40ZSymbiotaR2: An R Package for Accessing Symbiota2 Dataacceptedv1.0.02020-12-04 19:26:53 UTC562020-12-21 23:35:31 UTC520202917AustinKoontzDepartment of Biology & Ecology Center, Utah State University, Logan, Utah, USA0000-0002-6103-5894BenjaminBrandtNorthern Arizona University, Arizona, USACurtisDyresonDepartment of Computer Science, Utah State University, Logan, Utah, USAWilliamD.PearseDepartment of Biology & Ecology Center, Utah State University, Logan, Utah, USA, Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Rd., Ascot, Berkshire, SL5 7PY UK0000-0002-6241-316410.21105/joss.02917https://doi.org/10.5281/zenodo.4302571Rhttps://joss.theoj.org/papers/10.21105/joss.02917.pdfSymbiota, specimen-records, biodiversitytag:joss.theoj.org,2005:Paper/14422020-02-18T00:28:09Z2021-02-15T11:31:08ZSpeciesEvolver: A Landlab component to evolve life in simulated landscapesacceptedv2.0.0b32020-01-16 01:24:15 UTC462020-02-18 00:28:09 UTC520202066NathanJ.LyonsTulane University, Department of Earth and Environmental Sciences0000-0001-6965-3374JamesS.AlbertUniversity of Louisiana Lafayette, Department of Biology0000-0001-5477-1749NicoleM.GaspariniTulane University, Department of Earth and Environmental Sciences0000-0002-0803-369710.21105/joss.02066https://doi.org/10.5281/zenodo.3672119Python, PowerShellhttps://joss.theoj.org/papers/10.21105/joss.02066.pdfJupyter Notebook, Landlab, Landscape evolution, Phylogeography, Biodiversitytag:joss.theoj.org,2005:Paper/6182018-11-13T19:50:24Z2021-02-15T11:33:01ZhillR: taxonomic, functional, and phylogenetic diversity and similarity through Hill Numbersacceptedv0.3.02018-09-12 15:36:43 UTC312018-11-13 19:50:24 UTC320181041DaijiangLiDepartment of Wildlife Ecology and Conservation, University of Florida, Gainesville, FL 326110000-0002-0925-342110.21105/joss.01041https://doi.org/10.5281/zenodo.1486200Rhttps://joss.theoj.org/papers/10.21105/joss.01041.pdfHill numbers, biodiversity, phylogenetic diversity, functional diversity