tag:joss.theoj.org,2005:/papers/tagged/bedtoolsJournal of Open Source Software2020-03-06T17:24:08ZJournal of Open Source Softwarehttps://joss.theoj.orgtag:joss.theoj.org,2005:Paper/14612020-03-06T17:24:08Z2021-02-15T11:31:05Zcovtobed: a simple and fast tool to extract coverage tracks from BAM filesacceptedv1.0.02020-01-30 15:43:55 UTC472020-03-06 17:24:08 UTC520202119GiovanniBiroloDept. Medical Sciences, University of Turin, ITALYAndreaTelatinGut Microbes and Health Programme, Quadram Institute Bioscience, Norwich, UK0000-0001-7619-281X10.21105/joss.02119https://doi.org/10.5281/zenodo.3695204C++https://joss.theoj.org/papers/10.21105/joss.02119.pdfbedtools, bamtools, genomics, bioinformatics, target enrichment, sequence coveragetag:joss.theoj.org,2005:Paper/12092019-12-06T05:09:55Z2021-02-15T11:31:39ZBedtoolsr: An R package for genomic data analysis and manipulationacceptedv2.29.02019-09-10 17:41:30 UTC442019-12-06 05:09:55 UTC420191742MayuraN.PatwardhanThurston Arthritis Research Center, University of North Carolina, Chapel Hill, NC 27599, USACraigD.WengerIndependent Scholar, Long Beach Township, NJ 080080000-0002-7361-8456EricS.DavisCurriculum in Bioinformatics & Computational Biology, University of North Carolina, Chapel Hill, NC 27599, USA0000-0003-4051-3217DouglasH.PhanstielThurston Arthritis Research Center, University of North Carolina, Chapel Hill, NC 27599, USA, Curriculum in Bioinformatics & Computational Biology, University of North Carolina, Chapel Hill, NC 27599, USA, Department of Cell Biology & Physiology, University of North Carolina, Chapel Hill, NC 27599, USA, Lineberger Comprehensive Cancer Research Center, University of North Carolina, Chapel Hill, NC 27599, USA0000-0003-2123-005110.21105/joss.01742https://doi.org/10.5281/zenodo.3509513R, Pythonhttps://joss.theoj.org/papers/10.21105/joss.01742.pdfbedtools, genomics, data analysis, metaprogramming